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SCNpilot_expt_1000_bf_scaffold_8953_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8953_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..233)
DNA (231bp) protein (77aa)
Type 11 methyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBX3_9RHIZ
Type 11 methyltransferase {ECO:0000313|EMBL:EYR79203.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
methyltransferase
SCNpilot_expt_1000_bf_scaffold_8953_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(760..1104)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWA6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79201.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8953_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1303..1878)
DNA (576bp) protein (192aa)
Deaminase {ECO:0000313|EMBL:EYR82513.1}; EC=3.5.4.12 {ECO:0000313|EMBL:EYR82513.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
deaminase
Deaminase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A1P2_RHIFH
SCNpilot_expt_1000_bf_scaffold_8953_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2189..2422
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYI4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR77836.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-]
SCNpilot_expt_1000_bf_scaffold_8953_curated_5
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2447..2956)
DNA (510bp) protein (170aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K509_AGRVS
Uncharacterized protein {ECO:0000313|EMBL:ACM39957.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_expt_1000_bf_scaffold_8953_curated_6
Burkholderia andropogonis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3356..4090
DNA (735bp) protein (245aa)
LamB/YcsF family protein {ECO:0000313|EMBL:KKB62030.1}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;"
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000362FFAC
LamB/YcsF family protein; K07160 UPF0271 protein
SCNpilot_expt_1000_bf_scaffold_8953_curated_7
Burkholderia andropogonis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4095..5543
DNA (1449bp) protein (483aa)
60 kDa chaperonin {ECO:0000256|RuleBase:RU000419}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;"
chaperonin Cpn60/TCP-1; K04077 chaperonin GroEL
60 kDa chaperonin n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46QP4_CUPPJ
Displaying 7 items

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