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SCNpilot_expt_1000_bf_scaffold_8953_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1303..1878)

Top 3 Functional Annotations

Value Algorithm Source
Deaminase {ECO:0000313|EMBL:EYR82513.1}; EC=3.5.4.12 {ECO:0000313|EMBL:EYR82513.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 200.0
  • Bit_score: 290
  • Evalue 1.70e-75
deaminase similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 200.0
  • Bit_score: 289
  • Evalue 8.30e-76
Deaminase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A1P2_RHIFH similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 200.0
  • Bit_score: 289
  • Evalue 2.60e-75

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGGCGGAAGAGACCGAAGCCGGGCGCCTGCTCGATGCCCTGTTCGACACGATGGAAACCGGCATCATCCCGGTAACGCAGGCCGGGGTCGCGGCCGGCAACAAGATCTTCGGCGCCGCGCTGCTGCGCAAGTCGGACTTCGCCGCTGTGCTCGTCGAGACCAACAACGAGACGGAAAACCCGCTGTGGCACGGGGAGATCCACGCCCTGAAGCGCTTCTACGAGATGGAGGCGGCCGGACGGCCGGAAACGAAGGATCTCATCTTCCTGTCGACGCATGAGCCGTGCTCCATGTGCCTTTCGNNNNNNNNNNNNNNCCACGAGGATTCCCGGGATGCGTTCTCCATTCCGCACGACCTGAAGATCCTGAAGGAGGTGTTCACGCTGGAGCCGGGCGGCTACAACCGGACCAACGCCTTCTGGACGGGCCGGTCGATCCGCGATCTCGTCGACCTCCTTCCCGAGCCGCAGCGCGCATCGTTCGAGGCGCGGGCGGAAGCGATCCGGCAGAAATACGACGCCCTGTCGGCTGCCTACCAGGCGGGCAAGGCGGACAATGCCATCCCCCTCGCCTAG
PROTEIN sequence
Length: 192
MAEETEAGRLLDALFDTMETGIIPVTQAGVAAGNKIFGAALLRKSDFAAVLVETNNETENPLWHGEIHALKRFYEMEAAGRPETKDLIFLSTHEPCSMCLSXXXXXHEDSRDAFSIPHDLKILKEVFTLEPGGYNRTNAFWTGRSIRDLVDLLPEPQRASFEARAEAIRQKYDALSAAYQAGKADNAIPLA*