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SCNpilot_expt_1000_bf_scaffold_8953_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 4095..5543

Top 3 Functional Annotations

Value Algorithm Source
60 kDa chaperonin {ECO:0000256|RuleBase:RU000419}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.3
  • Coverage: 460.0
  • Bit_score: 219
  • Evalue 1.20e-53
chaperonin Cpn60/TCP-1; K04077 chaperonin GroEL similarity KEGG
DB: KEGG
  • Identity: 28.9
  • Coverage: 506.0
  • Bit_score: 166
  • Evalue 1.60e-38
60 kDa chaperonin n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46QP4_CUPPJ similarity UNIREF
DB: UNIREF100
  • Identity: 28.9
  • Coverage: 506.0
  • Bit_score: 166
  • Evalue 4.90e-38

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Taxonomy

Burkholderia andropogonis → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1449
ATGCGCACGCTGGCCGGACAACCGTTGCAGGAGGACATCGTCGAGGCCATCGCCCCGGCCTTGCGGGCGATCGCCGCGTCGATCGGCCCCGAGGGCCGTCATGTCATCTATTGCAACGGCGGCCGCGTGCAGGCTGCGCGCACGGGCAGCGAGATCGCCCGCCGGATCTGTTCGGATCATTTCGCCGGGCGCCTGCTGAAGGAAGCGCTTGTCGATGCCGAGCGGCAGTTCGGAGATGGAACCGCCCGTCTGGCCGTGATGGCCGGCGCGGCCCTTGCCGAAGGGCGCCGGGCCGGCGAGGCGGTGATCGAGACCGATCGCCTCGTCGAGGCGCTCGCCTTGCTGCGGCCGAAGCTGGACGCGGCCTTCGCGGAAGAGACCCGCGGTTGCGACACCCGCGCCGGGCTCGTCGCTGCCGCCGGGGTCGATGCCACGCTCGCCGGCCTCATTCTCGAAGCGGACGCCGCGGCCGGGCCGGGCGGGCTGGTCGAGGTCTCGGAGGCGCTGGAAAGCGCCGTGACCGCGGTCGACGGCTTCAGCTTCGAGGCGCGCCACGTCGGGGCGGGCGCACTGGCGGCGATGGACGATGTCCATGTCATCGTCGCCAACGAGATGCTGACGGATTTCAGGACGCTCGTGCCCGTGATCGAGGGATTTGCCGACCGCGGCAAGGCGCTGCTCGTCGTGGCGCGCGGCATCGAGGGCGCGGCGCTGCAACTGCTTGAACGGAACCGCAAGGCTGGCGTCGTCAAGACCGCGGCGCTCGTTCCGGGCGATGCCGGGCCGCGCGCCGTCGAAATCCTGGAAGACCTCGCGGCGGCGAGCGGCGCGACGATGATCTGCGCCCAGGCCGGCACCTCCATCGAGGGGCTGAAGCCCGCCATGCTGGGCAGGGCGGCAAAATTCCGTTTCGAGCGCGGGCGGGTCCACTTGGCCGGCGCGGAGGGCGCGCCGGAGCGCATCGCCATGCGCATCGCGCTGGCCGAGGCCGAGATCCGGGCGAAGCGCTACCTGCCGCTCGATCGCGAACATGCCGAGCGCCGCCGGGCGCGCCTTGCCGGACGCTGGGTGGAACTGGCCGTCGCCCGCGGGTTCGAATCCGCCGTGCAGATGGAAAGCGCGCGCCGCGCCCTCGTCGCGCTCCGCGCCGCCCGCACGGAAGGCGTCATCGCCGGCGGCGGGCGCGGGCTGGAGAACATCGCCGACCGCCTGAGGAGCGTCGCCGCGCACGATGCCGCCGGGCGTGCCGCTGCCGCCATGGTCGACGCGGCCCTGCGGGCGCCGGGCCTGTGCCTTCGCCGCAACGCCTCGGAAACACCCTCGCAGGCGCGCGGTGCCATGCCTGCCTCCCTCGCGGACCCGGCGCGGCTTTCCCGCGACGTGCTGGACGTCGCGCTTTCGCTTGCGGTGCGCCTTGCCGGGATCGGCGGGGCGGTCCTGCGCCATTGA
PROTEIN sequence
Length: 483
MRTLAGQPLQEDIVEAIAPALRAIAASIGPEGRHVIYCNGGRVQAARTGSEIARRICSDHFAGRLLKEALVDAERQFGDGTARLAVMAGAALAEGRRAGEAVIETDRLVEALALLRPKLDAAFAEETRGCDTRAGLVAAAGVDATLAGLILEADAAAGPGGLVEVSEALESAVTAVDGFSFEARHVGAGALAAMDDVHVIVANEMLTDFRTLVPVIEGFADRGKALLVVARGIEGAALQLLERNRKAGVVKTAALVPGDAGPRAVEILEDLAAASGATMICAQAGTSIEGLKPAMLGRAAKFRFERGRVHLAGAEGAPERIAMRIALAEAEIRAKRYLPLDREHAERRRARLAGRWVELAVARGFESAVQMESARRALVALRAARTEGVIAGGGRGLENIADRLRSVAAHDAAGRAAAAMVDAALRAPGLCLRRNASETPSQARGAMPASLADPARLSRDVLDVALSLAVRLAGIGGAVLRH*