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SCNpilot_expt_1000_bf_scaffold_3649_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1..420)

Top 3 Functional Annotations

Value Algorithm Source
NADP-dependent malic enzyme {ECO:0000313|EMBL:EYR83281.1}; EC=1.1.1.40 {ECO:0000313|EMBL:EYR83281.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 140.0
  • Bit_score: 274
  • Evalue 8.90e-71
NADP-dependent malic enzyme; K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 140.0
  • Bit_score: 259
  • Evalue 8.70e-67
malic enzyme n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000366B98E similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 140.0
  • Bit_score: 259
  • Evalue 1.60e-66

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGCCGGGAACCGACAAGACTGATCGCCAGAGGGCAACCGTGACGGAAAAGGAAGCGCTGGATTTCCATTCGTCCGGGCGGCCCGGCAAGCTGGAGATCACGCCGACCAAGCCGATGGCGACGCAACGCGACCTCTCGCTCGCCTATTCGCCTGGCGTCGCCGTGCCGGTGAAGGCCATCGCCGCGGACCCGGCGACCGCCTACGACTACACCACGCGCGGCAACATGGTCGCCGTCATCTCCAACGGCACCGCCATCCTCGGCCTCGGCAATCTCGGGGCGCTCGCCTCCAAGCCTGTCATGGAAGGCAAGTCCGTCCTCTTCAAGCGCTTCGCCGACGTCGATTCCATCGACCTCGAAGTCGACACCGAGAATGTCGACGAGTTCATCAACTGCGTGCGCTATCTCGGCCCCTCCTTC
PROTEIN sequence
Length: 140
MPGTDKTDRQRATVTEKEALDFHSSGRPGKLEITPTKPMATQRDLSLAYSPGVAVPVKAIAADPATAYDYTTRGNMVAVISNGTAILGLGNLGALASKPVMEGKSVLFKRFADVDSIDLEVDTENVDEFINCVRYLGPSF