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SCNpilot_expt_1000_bf_scaffold_8356_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1..930

Top 3 Functional Annotations

Value Algorithm Source
putative integrase similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 309.0
  • Bit_score: 529
  • Evalue 1.00e-147
  • rbh
Putative integrase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILU5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 309.0
  • Bit_score: 529
  • Evalue 3.20e-147
  • rbh
Putative integrase {ECO:0000313|EMBL:BAK67688.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 309.0
  • Bit_score: 529
  • Evalue 4.50e-147

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
CGGCACGAGATCATCGCGGCCAATCCTTGCGAAAAGGCCGTGGTCAACAAGTCCGACAACAAGCGGACGCGCTTCCTGACACTTGAGGAAGTCGCACGCCTGGGTGCGGCCTGTGATGCATTGGAGGCCGAGGGCGTCAACGTCAAAGCCCTCAACATCACCCGGCTGTGGGTGCTGACCGGCTGCCGCCGCAATGAAATCTCAGAACTGAAATGGGATGAAGTCGATCTGGATAATGGTCTGCTCGTCCTCGACGACAGCAAGACCGGCAAGTCGATCCGTCCGCTCTGCCTTGCGGCGGCGACCTTGCTCAAAGGCGTCGAGAAGGTGGACGACACGGATTATGTGTTTCCCGCCGATGAAGGCGACAGCTATTTCCAAGGCACCAAGAACATCTGGCCGAAGATCGTGAAGAAGGCTGAACTGACCGGCGTCACCCCGCATACGCTGCGTCATACGGTGGGTGCTACGGCCACCTCGCACGGCGAGGCGCTGGCGCTGACCGGAGCGATCCTCGGTCATGCGAATCTGCGCTCGACGATGATCTATGCCCATGTGCAGCATGATCCATCGGTGAAGGCCGCCAATCGCGTAGGCCGCCGGATCGCCTCGGCGCTGGCTGGCGAGACCAAGCCAGCCCCCCGCAAGCGTCGCAAGGCGGCCGAGCCCATACCGATCAGGACGGCGGCTCCCGCAAGAGGCGGCTTGCTACCGGATACGGAATGGGACGCGCTGACCGAGTTGGCCATGCTGCCGGAGGGAGAAACAGGTTTCCTGGCTTCGGCCAGCGATCCGGCATTTCTCATGTTGGCGAAGCGAGGCTTCGCAGACGCGATTCCCGGCCCGAGCGAATTGCTAGCGTGGTGGCGCATCAGTTCGGTCGGCACGGCCTTGCTAGCAGCACAGGCAGAGGAGCGTACCGCCGCTTAA
PROTEIN sequence
Length: 310
RHEIIAANPCEKAVVNKSDNKRTRFLTLEEVARLGAACDALEAEGVNVKALNITRLWVLTGCRRNEISELKWDEVDLDNGLLVLDDSKTGKSIRPLCLAAATLLKGVEKVDDTDYVFPADEGDSYFQGTKNIWPKIVKKAELTGVTPHTLRHTVGATATSHGEALALTGAILGHANLRSTMIYAHVQHDPSVKAANRVGRRIASALAGETKPAPRKRRKAAEPIPIRTAAPARGGLLPDTEWDALTELAMLPEGETGFLASASDPAFLMLAKRGFADAIPGPSELLAWWRISSVGTALLAAQAEERTAA*