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SCNpilot_expt_1000_bf_scaffold_8356_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8356_curated_1
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..930
DNA (930bp) protein (310aa)
putative integrase rbh
Putative integrase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILU5_9SPHN rbh
Putative integrase {ECO:0000313|EMBL:BAK67688.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_expt_1000_bf_scaffold_8356_curated_2
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1005..1955)
DNA (951bp) protein (317aa)
Cation transporter {ECO:0000313|EMBL:KHK90308.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
cation transporter n=1 Tax=Sphingomonas melonis RepID=UPI00037C63D3 rbh
cation efflux family protein rbh
SCNpilot_expt_1000_bf_scaffold_8356_curated_3
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1952..2143)
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:AJA11491.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489C6E
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8356_curated_4
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3246..4148
DNA (903bp) protein (301aa)
Transporter {ECO:0000313|EMBL:EXS70611.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
transporter n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C778 rbh
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC rbh
SCNpilot_expt_1000_bf_scaffold_8356_curated_5
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4498..5241
DNA (744bp) protein (248aa)
hemolysin D n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248985C rbh
secretion protein HlyD rbh
Hemolysin D {ECO:0000313|EMBL:AJR26704.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
SCNpilot_expt_1000_bf_scaffold_8356_curated_6
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

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comp(6139..6516)
DNA (378bp) protein (126aa)
Tax=GWB2_Planctomycetes_41_19_curated
Uncharacterized protein n=2 Tax=Capnocytophaga RepID=J0NAJ7_CAPOC
SCNpilot_expt_1000_bf_scaffold_8356_curated_7
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(6667..7173)
DNA (507bp) protein (169aa)
Tax=GWA2_WOR_2_47_8_curated
SCNpilot_expt_1000_bf_scaffold_8356_curated_8
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7772..8446
DNA (675bp) protein (225aa)
cation transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248985D rbh
heavy metal efflux pump CzcA rbh
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:AGH50421.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_expt_1000_bf_scaffold_8356_curated_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9896..10381
DNA (486bp) protein (162aa)
ATPase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489861
Putative cation transport ATPase {ECO:0000313|EMBL:GAD48826.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
heavy metal translocating P-type ATPase
Displaying 9 items

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