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SCNpilot_expt_1000_bf_scaffold_8356_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 4498..5241

Top 3 Functional Annotations

Value Algorithm Source
hemolysin D n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248985C similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 247.0
  • Bit_score: 422
  • Evalue 3.40e-115
  • rbh
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 247.0
  • Bit_score: 411
  • Evalue 1.90e-112
  • rbh
Hemolysin D {ECO:0000313|EMBL:AJR26704.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 247.0
  • Bit_score: 411
  • Evalue 6.40e-112

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Taxonomy

Sphingobium sp. YBL2 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
TTGTCGCTTGCGGAATCGAATCTCGCGCGCGAGCAGCGCCTGTTCAATGAACGGGTTTCCCCCGAACAGGATCTGATCGCCGCGCGCACGACCGCGACTGAGGCGCGCATCGCCCTACGCCTTGCCCAGCAGCAGGTCGCGGCGGCCGGTGGCGGAGGCGGAGCACTCAATCGCATTGCGATTACCGCGCCGATCGCCGGGCAGGTCGTTTCCCGGAATGTGACTCTCGGACAGACCGTCGCGGCGGATGCCGAGTTGTTCCGCGTGGCAAACCTTTCCCGCGTCGCGGTCACGCTTGCCCTGTCTCCGGCCGATGCAGGCAAAGTGCGCCCCGGCTCGGGGATCGAGATCGTTTCAGGCGATCGCAGTTCGGCTGCGAGGGTCGATTTCGTCTCGCCGATCCTCGACGAGACGACGCGCCTCGCAACTGTGATTGCCGTCATCGATAATCGCTCGGGCCAGTGGCGCGTGGGCGAGCCTGTGACGGCTTCGATAAAACTGCCCGGCGGTGGCGCTGAATCAGTGCTCGTTCCGCAAAGCGCGATTCAGACAATCGAAGGACGGCCGACCGTGTTCGTCCGCACCGACCATGGCTTCCAGGCCACGCCGGTCACCCTCGGCGCTCCGAGCGGCGACAATGTGGTCGTGACCTCGGGCCTTACCGGCAACGAACTGATCGCTGGACCCAACAGCTTCACCCTCAAGGCTGAGCTTGGAAAAGGCGAAGCGGAGCACGGACACTGA
PROTEIN sequence
Length: 248
LSLAESNLAREQRLFNERVSPEQDLIAARTTATEARIALRLAQQQVAAAGGGGGALNRIAITAPIAGQVVSRNVTLGQTVAADAELFRVANLSRVAVTLALSPADAGKVRPGSGIEIVSGDRSSAARVDFVSPILDETTRLATVIAVIDNRSGQWRVGEPVTASIKLPGGGAESVLVPQSAIQTIEGRPTVFVRTDHGFQATPVTLGAPSGDNVVVTSGLTGNELIAGPNSFTLKAELGKGEAEHGH*