ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_expt_1000_bf_scaffold_8356_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(6139..6516)

Top 3 Functional Annotations

Value Algorithm Source
Tax=GWB2_Planctomycetes_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 125.0
  • Bit_score: 108
  • Evalue 5.80e-21
Uncharacterized protein n=2 Tax=Capnocytophaga RepID=J0NAJ7_CAPOC similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 125.0
  • Bit_score: 92
  • Evalue 2.40e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB2_Planctomycetes_41_19_curated → Brocadiales → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 378
ATGACGGCCCCATCGACGATCAGGCCGAAATCGAGTGCGCCGAGGCTCATCAGGTTCGCCGAAACGCCGCCGCGCAACATCCCGAAGCTGGTCATCAGCATGGTGATCGGGATCACCAGCGCCGCGATCAGCGCCGCCCGGAAATTGCCGAGCAGCAGGAACAGCACGACGATAACCAGCAGCGCCCCTTCGGTCAGGTTCTTCGCAACTGTCTTGATCGTGGAATTGACGAGCGCCGTGCGGTCGAGCACCGGCTGTATCACTACGTCGGTCGGTAGTGAGGCGTTGATCTCGGTCAGCCGCTCCGCGACGGACGAGGCCACGGCACGACTATTCTCACCGATCCGCATGATGGCGGTGCCGACGACGACCTCTTGA
PROTEIN sequence
Length: 126
MTAPSTIRPKSSAPRLIRFAETPPRNIPKLVISMVIGITSAAISAARKLPSSRNSTTITSSAPSVRFFATVLIVELTSAVRSSTGCITTSVGSEALISVSRSATDEATARLFSPIRMMAVPTTTS*