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SCNpilot_expt_1000_bf_scaffold_8356_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3246..4148

Top 3 Functional Annotations

Value Algorithm Source
Transporter {ECO:0000313|EMBL:EXS70611.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 295.0
  • Bit_score: 410
  • Evalue 2.90e-111
transporter n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C778 similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 299.0
  • Bit_score: 407
  • Evalue 1.40e-110
  • rbh
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 300.0
  • Bit_score: 403
  • Evalue 6.20e-110
  • rbh

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Taxonomy

Sphingobium sp. Ant17 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGCGCGCGCAGCTTGCCGCCGCGATCACCGAGGCGGACATTCGCCTTCAAGTCACCGAACTGTATGTGAACGCCGTGGCCGCCGAACGGCGGCTCACGACGGCCCTCGATCAGGCGCGTATCGCGAACGAAGCACTGAATGCCGCGCGCGTGCGTGTCCGGGCGGGACGCGCTTCACCGATCGAGGAACAACGCGCGGATGTCACCCGGCTCAATGCCGAAGCTGCGGTGGAGAACGCACGTCGCTTGCTCGATGCTGCGCGTCTCAACCTCGGCCGTAGGATCGGACAGCCTGTGACGGGGGCGCTCGATCTGACAGCCCTCGACGATCTACCCGCCGCCTATGGCCCGCAACTTGCGCCGACTGTGGAAGGCACTTTGGCGCTCGCCGCTGCCGACGCAGACCTCGCGGTTGCCGACGCTGGTGTTCGGCTGGCCAGATCGCAGCGCATTCCCGACGTCACGGTCGGGCCAGGCGTGCGTCGATTCTCGGAATCGAACGATACTGCCGCCCTGTTCAGCATTTCGGTTCCGATTCCGCTGTTCAACAGCGGCAGAGCCGCCGTGGGACAGGCCAGCGCCGAACGCAGCCGTGCAGAAGCACAGCGCCGCATGACTGCGCTCGATGTCGAGCAGGCGATCCTCGACGCCCGAACGGAAGCGGGCAATGCCGCCACCAACGCCCGAACCGCTAATGGTCCTGCGTTGGCAGCCGCCCAGGAAGCCGCCCGCATCGCACGCATCGGTTATCGCGAAGGCAAGTTCGGCCAGCTCGATCTGCTCGATGCCGAACGGACGCTGGCCGAAACCCGGCTGACCGCGATCGACGCGCTCGTCGCCTATCAGAACGCCAGGGCACGGCTTGAGCGCCTGACCGCTCCCGCACCCGAACAGGGGAATTGA
PROTEIN sequence
Length: 301
MRAQLAAAITEADIRLQVTELYVNAVAAERRLTTALDQARIANEALNAARVRVRAGRASPIEEQRADVTRLNAEAAVENARRLLDAARLNLGRRIGQPVTGALDLTALDDLPAAYGPQLAPTVEGTLALAAADADLAVADAGVRLARSQRIPDVTVGPGVRRFSESNDTAALFSISVPIPLFNSGRAAVGQASAERSRAEAQRRMTALDVEQAILDARTEAGNAATNARTANGPALAAAQEAARIARIGYREGKFGQLDLLDAERTLAETRLTAIDALVAYQNARARLERLTAPAPEQGN*