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SCNpilot_expt_1000_bf_scaffold_8356_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 7772..8446

Top 3 Functional Annotations

Value Algorithm Source
cation transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248985D similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 219.0
  • Bit_score: 373
  • Evalue 1.60e-100
  • rbh
heavy metal efflux pump CzcA similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 221.0
  • Bit_score: 362
  • Evalue 1.20e-97
  • rbh
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:AGH50421.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 221.0
  • Bit_score: 362
  • Evalue 5.20e-97

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Taxonomy

Sphingomonas sp. MM-1 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
GTGCGGGGCCGCGACGTTGCCGGTGTCGTTGCCGATGCGGAGGCCGCAATCGCCAGCCAGGTGCGGCTCCCTAGCGGACAGTATCTGGATTGGGGTGGGCAGTTCGAGAATCTTCAGTCCGCGAGCGAGCGGCTGATGCTCGTGGTGCCTGCCTGCTTCGCGCTGATCATACTGCTTCTATATGGAGCTTTGGGAAGTGTTCGCGATGCGGCGATCGTGTTCACCGGGGTTCCGTTGGCGCTGGTCGGCGGTGTCCTGGCCCTGTTCTTGCGAGGGATGCCGTTCTCGATCTCGGCGGCAGTGGGCTTCATCGCCCTTTCGGGCATCGCGGTCCTCAACGGTCTTGTGATGGTGACGTCGATCCAGGCGCTGATGGAGGGCGGCATGGGTCGCGCGAAAGCGGCCTATGAAGGCGCGATGATGCGTCTGCGCCCGGTCGTCATGACCGCGCTGGTCGCTTCGCTCGGGTTCGTGCCCATGGCCATGGCCACGGGCGCGGGAGCGGAGGTGCAGAAACCGCTCGCGACCGTCGTGATCGGCGGCCTGATCTCCGCGACGCTGCTCACCCTGTTCGTGCTGCCGACGCTCTATGCCCGCTACGGCAGACGCATGGAGGAAACTGAGCAGAGCGGCGACACGGAAGAAGGGAGCACGGAGCCGCTCCCCGCATCGTGA
PROTEIN sequence
Length: 225
VRGRDVAGVVADAEAAIASQVRLPSGQYLDWGGQFENLQSASERLMLVVPACFALIILLLYGALGSVRDAAIVFTGVPLALVGGVLALFLRGMPFSISAAVGFIALSGIAVLNGLVMVTSIQALMEGGMGRAKAAYEGAMMRLRPVVMTALVASLGFVPMAMATGAGAEVQKPLATVVIGGLISATLLTLFVLPTLYARYGRRMEETEQSGDTEEGSTEPLPAS*