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SCNpilot_expt_1000_bf_scaffold_8356_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1005..1955)

Top 3 Functional Annotations

Value Algorithm Source
Cation transporter {ECO:0000313|EMBL:KHK90308.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 315.0
  • Bit_score: 442
  • Evalue 5.60e-121
cation transporter n=1 Tax=Sphingomonas melonis RepID=UPI00037C63D3 similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 309.0
  • Bit_score: 386
  • Evalue 2.00e-104
  • rbh
cation efflux family protein similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 332.0
  • Bit_score: 385
  • Evalue 1.80e-104
  • rbh

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGAAGACCGGTCCCGGCAGCACGCAGAGTGTCGAAACACTGACACACAACCACGACTTCCTCGGGGCAACGCACGACGACAACGCCCGGCGGACACGCATCGTCGTCGCGTTGACGCTGGCGATGATGGTCGCCGAGATCGCCGCCGGCTATCTGACCGGTTCGATGGCACTGCTTGCGGATGGGTTCCACATGGCGACGCACGCCGGGGCGCTCGGCGTCGCTGCATTTGCTTACGGCTATGCCCGGCGTCATGCGCATGATCGCCGCTTCACTTTCGGCACCGGGAAAGTCGGCGATCTGGCCGGTTTCGCCAGCGCGCTCGTGCTTGCCATCTTTGCGCTCGGCATTGGCGTGGAATCGATACGTCGCCTGTTCGCACCTGCTGACATCGCCTATGCCGATGCGATCGGGATCGCGTTCCTCGGCCTGATAGTCAATCTCGTCAGTGCCTGGTTGCTTGGGGCTGACCATCATCACGGACACGATCACGATCATCACGCTCACGGCCATTCCGGTCATGCGCATCACGAGCACGACAACAATCTGCGCGCAGCCTATTTCCATGTGCTTGCCGACGCCCTGACCTCGGTGTTGGCGATCCTCGCGCTGCTTGCGGGGCTCTATCTCGGCTGGCGCTGGATGGATGCCGCGATGGGGATTGTTGGCGCAATCGTTATCGCCCGCTGGTCATGGGGGCTATTGCGCGACAGTTCGGCGGTTCTGGTCGATGCCGCTGCCAACCCAAGTCTCGAAGACGAAATCCGCGAAGCAATAGAGGACGGCGACGCCCAAATAACCGACCTTCATGTATGGCGGGTTGGACCAGGTAAGTTTTCCGCTATCGTCGCCTTGACTGCTGAACGGCCTCTTCCTCCCGCAGACTATGCCAAGCGCGTGCGGGTGCATGACGAGCTTGTCCACGTCACGATAGAGCCGCACCCAGCTTGA
PROTEIN sequence
Length: 317
MKTGPGSTQSVETLTHNHDFLGATHDDNARRTRIVVALTLAMMVAEIAAGYLTGSMALLADGFHMATHAGALGVAAFAYGYARRHAHDRRFTFGTGKVGDLAGFASALVLAIFALGIGVESIRRLFAPADIAYADAIGIAFLGLIVNLVSAWLLGADHHHGHDHDHHAHGHSGHAHHEHDNNLRAAYFHVLADALTSVLAILALLAGLYLGWRWMDAAMGIVGAIVIARWSWGLLRDSSAVLVDAAANPSLEDEIREAIEDGDAQITDLHVWRVGPGKFSAIVALTAERPLPPADYAKRVRVHDELVHVTIEPHPA*