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SCNpilot_expt_1000_bf_scaffold_4811_curated_13

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(10426..12000)

Top 3 Functional Annotations

Value Algorithm Source
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 543.0
  • Bit_score: 918
  • Evalue 5.80e-264
UvrABC system protein B (Fragment) n=1 Tax=Rhizobium sp. CF122 RepID=J3BUY1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 534.0
  • Bit_score: 868
  • Evalue 4.90e-249
  • rbh
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 531.0
  • Bit_score: 844
  • Evalue 2.40e-242
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1575
CCGCCGCCGACCCTCTTCGAATACGTGCCGGACAACGCGCTGATCTTCATCGACGAAAGCCACGTCACGATCCCGCAGATCGGCGCCATGTACCGCGGCGACTTCCGCCGCAAGGCGACGTTGGCCGAATACGGCTTCCGCCTGCCCTCCTGCATGGACAACCGGCCGCTGCGCTTCGAGGAATGGGACGCCATGCGCCCGGATACGGTCGCCGTCTCGGCGACGCCCGGCGGCTGGGAGCTGGAACAGTCCGGCGGCGTCTTCGCCGAGCAGGTCATCCGCCCGACCGGCCTCATCGACCCGCCGGTCGAGGTACGCCCGGCCAAGAGCCAGGTGGACGACGTGCTGGGCGAGATCCGCGAGACCGCGCAGGCCGGCTACCGCACGCTCGTCACCGTGCTCACCAAGCGCATGGCCGAGGACCTCACCGAATACCTGCACGAGCAGGGCGTGCGCGTGCGCTACATGCATTCCGACATCGACACGCTGGAGCGCATCGAGATCATCCGTGACCTGCGCCTCGGCGCCTTCGACGTCCTCGTCGGCATCAACCTGCTGCGCGAAGGCCTCGACATTCCCGAATGCGGCTTCGTCGCCATCCTCGACGCCGACAAGGAGGGCTTTCTGCGCTCCGAGACCTCGCTCGTCCAGACCATCGGCCGCGCGGCGCGAAACGTCGACGGCAAGGTCATCCTCTATGCCGACCAGATCACCGGTTCGATGCAGCGCGCCATGGACGAGACGACCCGCCGCCGCGAAAAGCAGGTCGCCTACAACGAGGCGCACGGCATAACCCCGGAATCGGTGAAGGCGAAGATCTCCGACATCCTCGACTCGGTCTACGAGCGCGACCACGTCCGCGCCGACATCTCGGGCGTCAGCGGCAAGGGCTTCGCCGACGCCGGCCACCTCGTCGGCAACAACCTCAAGGCCCATCTCGAAGCGCTCGAAAAGCAGATGCGCGACGCCGCCGCCGACCTCGACTTCGAAGCCGCCGCCCGCATCCGCGACGAGATCAAGCGCCTCAAGGCCGCCGAACTCGCCGTCATGGACGACCCGATGGCGCGCGACGAAGCAAGATCGCAGGAAGGTGGAGGAGAGGGCAAAAGCTCGGCGAAGCCGCAAGGCCAGGCGACCGTCGCCGGTCGTCCGGCGCCCCGTGCGGAGGCCAGCCCGAAGGGCGGTACCGCCGTGAGCACGGAAGAGAATGGCAAAAGCTATTTTGCCAAACCCTCGCTCGACGACATGGGCCCGGGCACCGACACCGAACGCCCGCTCTTCCGCAAGCCCGACCTCGACGAGATGGGCCGCGACGTAGCCACCCCGGCCGGCAAATCCCTCTTCCGCAGGAACACCCTCGACGAGATGACCGTCGGCCGCACCGAAAAACCCGTCACCGGCGACCTCCCCCAACGCCCGGACGAAACCCTTTCGACCAAGAAACGCACTGCACCGTTGCCAGACGAAGCGAAGCCGGTCCGCCGGGAAAAGATCGGCGTGGGAAGCTATGAGGATCCGGGTGAAGCGAAGCGCAAGGGGCGCACCAAGGGCAAGACCGGGCGACCGGGGCGGTAA
PROTEIN sequence
Length: 525
PPPTLFEYVPDNALIFIDESHVTIPQIGAMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPDTVAVSATPGGWELEQSGGVFAEQVIRPTGLIDPPVEVRPAKSQVDDVLGEIRETAQAGYRTLVTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLVQTIGRAARNVDGKVILYADQITGSMQRAMDETTRRREKQVAYNEAHGITPESVKAKISDILDSVYERDHVRADISGVSGKGFADAGHLVGNNLKAHLEALEKQMRDAAADLDFEAAARIRDEIKRLKAAELAVMDDPMARDEARSQEGGGEGKSSAKPQGQATVAGRPAPRAEASPKGGTAVSTEENGKSYFAKPSLDDMGPGTDTERPLFRKPDLDEMGRDVATPAGKSLFRRNTLDEMTVGRTEKPVTGDLPQRPDETLSTKKRTAPLPDEAKPVRREKIGVGSYEDPGEAKRKGRTKGKTGRPGR*