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SCNpilot_expt_1000_bf_scaffold_3591_curated_20

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 18310..18555

Top 3 Functional Annotations

Value Algorithm Source
Homoprotocatechuate degradative operon repressor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETU0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 81.0
  • Bit_score: 147
  • Evalue 5.30e-33
Homoprotocatechuate degradative operon repressor {ECO:0000313|EMBL:EYR78701.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 81.0
  • Bit_score: 147
  • Evalue 7.40e-33
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 81.0
  • Bit_score: 124
  • Evalue 1.20e-26

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGCTGCGCTCGCTGGAGGAGCGCCGTCTCATCTCCCGGCACAAGGACAAGGACGACGGTCGCCGCGTGCTGCTGCGGCTCGCGCCGGCCGGCCAGGCGGTCATCGACGAGGTGATGCCGGATTCCCGCCGGGTCTATGCGGATATCGACACCCGCTTCGGCGCGGAAAGGGTCGAGCAGCTTCTCGACATGCTGGAAGAGCTCGCCGCCCTCAAGCTCGACGGCAAAGGGGGCGGCGAGGAATAG
PROTEIN sequence
Length: 82
MLRSLEERRLISRHKDKDDGRRVLLRLAPAGQAVIDEVMPDSRRVYADIDTRFGAERVEQLLDMLEELAALKLDGKGGGEE*