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SCNpilot_expt_1000_bf_scaffold_6466_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(11366..12307)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXJ2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 313.0
  • Bit_score: 508
  • Evalue 4.50e-141
  • rbh
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EYR77732.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 313.0
  • Bit_score: 508
  • Evalue 6.30e-141
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 323.0
  • Bit_score: 242
  • Evalue 2.50e-61

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGGCTGATACCCCCGTTTCCCGTCCGGCACGCATTGCCACGCTTGCCTGCGCAGGCCTTCTTGCAACGCTTGCCGGCTGCGCCAGCGTGGCCGAGGACGCGGCGACGGCAAGGACCGTGACGCCCGCTTCGGCAACGCCGGCCACGACGGATATTGCCGCCGGCGACGAAACCACGACCGAAGTCGCCTATGCCGCCCTGCCGATGGCAAAGCCCGGCACCGAGAGCACGCCGCAAGCCCTGCCGGCACCGGTCGCCGTCGCGGCAAACGCCGCCGAGGCGGCCGTTCCGGTCTCCGCGCTCGCCGAGGCAAGGCCCGTGACGGGCGCCGCGGCCGCCACAGCCGCGCTGGTCTCCAATACCGGCGGCGGGGCCGCCCCGGCCGGCGAAATGCCGCAGAGCTTCGACACGGTCATCGGCGTCTCGGTCATGGAGCCGGGCTTCGACACCGGCGAGCCGGAAGGCCTTGAACAACTCGTGGCCACCCGCAAGATCGTGCCGGTCGCAAAGCCCGCCCTGCTGAGCAACGCCGTCCTGACCACCGAGACCCGCCTCGTCGTGCCGCAGGCCGAGCAGCCGTTCCAGAAATCCGGCACGCCCATCGATGGCCTCATCAGCAAATATGCCTCGCTCTACGGCATTCCGGAATCGCTGCTCCACCGCGTCGTCAAGCGCGAAAGCCGCTATAATCCGAAGGCCTTCAACCGCGGCCACTACGGCCTGATGCAGATCAAGTATGCGACGGCGCGGAGCATGGGCTTCGAAGGCCCGGCCGAAGGCCTGTTCGACGCCGAAACGAACATCAAATATGCCGGCAAGTACCTGCGCGGCGCCTGGCTCGTCGCCGACGACAAGAACGACGGCGCCGTGCGCCTCTACGCGGCCGGCTACTACTATCACGCCAAGCGCAAGGGCCTGCTCGACGAGACGGGCCTGCGATAA
PROTEIN sequence
Length: 314
MADTPVSRPARIATLACAGLLATLAGCASVAEDAATARTVTPASATPATTDIAAGDETTTEVAYAALPMAKPGTESTPQALPAPVAVAANAAEAAVPVSALAEARPVTGAAAATAALVSNTGGGAAPAGEMPQSFDTVIGVSVMEPGFDTGEPEGLEQLVATRKIVPVAKPALLSNAVLTTETRLVVPQAEQPFQKSGTPIDGLISKYASLYGIPESLLHRVVKRESRYNPKAFNRGHYGLMQIKYATARSMGFEGPAEGLFDAETNIKYAGKYLRGAWLVADDKNDGAVRLYAAGYYYHAKRKGLLDETGLR*