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SCNpilot_expt_1000_bf_scaffold_6416_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(10185..10676)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Rhizobium mongolense RepID=UPI0003B49EE4 similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 165.0
  • Bit_score: 236
  • Evalue 2.30e-59
phage integrase family protein similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 165.0
  • Bit_score: 235
  • Evalue 1.60e-59
Phage integrase family protein {ECO:0000313|EMBL:AFL48854.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 165.0
  • Bit_score: 235
  • Evalue 7.00e-59

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGGGCCGACCGAAGTCAGCCGCCAGCGAGCGCTTCATTCCCATCCTGCCCATGGTCGTGAACGCGTTACGCGAATGGAAGCTCGCATGCCCGAAGGTCGAAATCGAGGAAAAGGGCGAGAAACGCCGCGTGCTCGATCTCGTTTTCCCTAACGGAAACGGCAAGGTCGAAAGCCTCGCCAATATCATCAACCGCGGCCTCGTACCGACAATGATCAAGGCCGGCGTCGCGATCGACACCGGCGAGGTTGACAAGGACGGGAACCCCATCCTCGACGCCAAGTATTCCGGGATGCATGCTCTCCGACACTTTTATGCCTCCTGGCTGATCAATCGCCGACAGGATGGCGGGCGCGAGCTTCCGCCGAAGGTGGTTCAAGAGCGCCTTGGCCATTCAACGATCGCTATGACGCTCGATACCTACGGGCACCTCTTTCCGAGCGGGAACGAGGCCGCGGAAATGGCGGAGGCCGAAGCTTCGTTCTTGCGTTGA
PROTEIN sequence
Length: 164
MGRPKSAASERFIPILPMVVNALREWKLACPKVEIEEKGEKRRVLDLVFPNGNGKVESLANIINRGLVPTMIKAGVAIDTGEVDKDGNPILDAKYSGMHALRHFYASWLINRRQDGGRELPPKVVQERLGHSTIAMTLDTYGHLFPSGNEAAEMAEAEASFLR*