name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_6416_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..1093
|
Penicillin-binding protein 1C {ECO:0000313|EMBL:EYR84170.1}; EC=2.4.2.- {ECO:0000313|EMBL:EYR84170.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Penicillin-binding protein 1C n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9WYQ4_RHILT
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1748..2548)
|
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWV2_9RHIZ
rbh
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EYR83401.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2545..3420)
|
Hydroxymethylglutaryl-CoA lyase MvaB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMP4_9RHIZ
rbh
Hydroxymethylglutaryl-CoA lyase MvaB {ECO:0000313|EMBL:EYR83400.1}; EC=4.1.3.4 {ECO:0000313|EMBL:EYR83400.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
mvaB; hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5417..5800)
|
Endoribonuclease L-PSP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERJ4_9RHIZ
Endoribonuclease L-PSP {ECO:0000313|EMBL:EYR83398.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
endoribonuclease L-PSP
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5813..6766)
|
Carboxyl transferase family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C8P1_9RHIZ
rbh
Carboxyl transferase family protein {ECO:0000313|EMBL:EYR83397.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7389..8165)
|
Acyl-CoA dehydrogenase AcdA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPI6_9RHIZ
rbh
Acyl-CoA dehydrogenase AcdA {ECO:0000313|EMBL:EYR83396.1}; EC=1.3.99.- {ECO:0000313|EMBL:EYR83396.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
acyl-CoA dehydrogenase domain-containing protein; K00253 isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8686..9846)
|
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0M8_9RHIZ
rbh
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:EYR83393.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative fumarylacetoacetate
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10185..10676)
|
integrase n=1 Tax=Rhizobium mongolense RepID=UPI0003B49EE4
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:AFL48854.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_9
unknown
|
Not on your lists |
comp(12270..12449)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_10
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12577..12846
|
hypothetical protein
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A121_RHIFH
Uncharacterized protein {ECO:0000313|EMBL:CCE94922.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_11
unknown
|
Not on your lists |
14193..14852
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_12
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15086..15814
|
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P3S9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAV40335.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_13
unknown
|
Not on your lists |
15818..16129
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_14
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16129..17379
|
Peptidase U7 n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P3T6_9RHOB
rbh
Peptidase U7 {ECO:0000313|EMBL:EAV40342.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
peptidase S49
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_15
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17738..18076
|
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HZJ7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPE98441.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_16
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18246..19103
|
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SJ01_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB50065.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
phage-related tail protein
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_17
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19103..20617
|
Phage-related tail protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P3T2_9RHOB
rbh
Phage-related tail protein {ECO:0000313|EMBL:EAV40338.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
phage-related tail protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6416_curated_18
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20921..21919
|
Phage late control D family protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5K2K4_9RHIZ
Phage late control D family protein {ECO:0000313|EMBL:ELT51104.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
phage late control D family protein; K06905
|