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SCNpilot_expt_1000_bf_scaffold_6416_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(7389..8165)

Top 3 Functional Annotations

Value Algorithm Source
Acyl-CoA dehydrogenase AcdA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPI6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 258.0
  • Bit_score: 490
  • Evalue 1.00e-135
  • rbh
Acyl-CoA dehydrogenase AcdA {ECO:0000313|EMBL:EYR83396.1}; EC=1.3.99.- {ECO:0000313|EMBL:EYR83396.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 258.0
  • Bit_score: 490
  • Evalue 1.50e-135
acyl-CoA dehydrogenase domain-containing protein; K00253 isovaleryl-CoA dehydrogenase [EC:1.3.8.4] similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 257.0
  • Bit_score: 463
  • Evalue 5.60e-128
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGTCCGAGCCGGGCGCGGGTTCGGATGTCGTCTCGATGAGGCTGCGGGCGGAAAAGCGTGGGCCGCGCTATATCCTCAACGGCAGCAAGATGTGGATCACCAACGGGCCGGATGCGGACGTGCTGGTGGTCTATGCCAAGACCGATCCCGAAGCCGGTCCGCGCGGCATCACCGCCTTCCTCGTCGAGAAGGGCTTCAAGGGCTTTTCCACCGCGCAGAAGCTCGACAAGCTCGGCATGCGTGGCTCCAACACCTGCGAACTGGTCTTCACCGATTGCGAGGTGCCGGAGGAGAACGTGATGGGCACCGTGGGGCGCGGCGTCAACGTGCTGATGTCCGGCCTCGATTACGAGCGCGTCGTGCTGTCCGGCGGTCCGCTCGGCATCATGGCCGCCTGCCTCGATGTCGTGGTGCCCTATCTGCACGAGCGCAAGCAGTTCGGCCGGCCCATCGGCGAGTTCCAGCTCATGCAGGGCAAGGTCGCCGACATGTATGTCGCGCTCAATGCCTGCCGCGCCTATGTCTATGCCGTGGCGAGCGCCTGCGACCGCGGTGAGACGACGCGCAAGGACGCCGCCGGCTGCATCCTCCATTCCGCCGAGATGGCGACCAGGCTGGCGCTGGAGGCCATCCAGTCGCTCGGCGGCAACGGTTATATCAACGACTATCCGACCGGCCGCCTGCTGCGCGATGCGAAACTCTACGAGATCGGCGCCGGCACCTCGGAAATCCGCCGCATGCTGATCGGCCGCGAAATCTTTGAGGAGACGCTGTGA
PROTEIN sequence
Length: 259
MSEPGAGSDVVSMRLRAEKRGPRYILNGSKMWITNGPDADVLVVYAKTDPEAGPRGITAFLVEKGFKGFSTAQKLDKLGMRGSNTCELVFTDCEVPEENVMGTVGRGVNVLMSGLDYERVVLSGGPLGIMAACLDVVVPYLHERKQFGRPIGEFQLMQGKVADMYVALNACRAYVYAVASACDRGETTRKDAAGCILHSAEMATRLALEAIQSLGGNGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGREIFEETL*