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SCNpilot_expt_1000_bf_scaffold_6416_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5813..6766)

Top 3 Functional Annotations

Value Algorithm Source
Carboxyl transferase family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C8P1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 317.0
  • Bit_score: 608
  • Evalue 4.20e-171
  • rbh
Carboxyl transferase family protein {ECO:0000313|EMBL:EYR83397.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 317.0
  • Bit_score: 608
  • Evalue 5.90e-171
propionyl-CoA carboxylase; K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 317.0
  • Bit_score: 542
  • Evalue 1.20e-151
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
GTGAAGGCCGCGACGGGCGAGGTGGTGACGGCCGAAGACCTCGGCGGCGGCGATGTGCACACCCGCCTTTCCGGCGTCGCCGATCATCTGGCGCGCGATGATCGCCATGCGCTGGCCATCGCCCGGGGGATCGCCGCCAATCTCAACACGCACAAGCCGCCGGTCGTGAGGTCCGGCGCGGGCGATGCCCCGGTCTACGACCCGGAAGAACTTCTCGGCATCGTGCCGGCCGACACGCGCACGCCCTATGATGTGCGCGAGGTGATCGCCCGCGTGGTCGACGGCTCGCGCTTCGACGAGTTCAAGGCCCGCTTCGGCACCACGCTCGTCTGCGGCTTCGCGGCCCTCCACGGCCTGCCCGTCGGCATCGTCGCAAGCAACGGCGTGCTCTTCTCCGAGGCGGCGCTGAAGGGGGCGCATTTCATCGAGCTCTGCGCCCAGCGTTCCATCCCACTTCTCTTCCTGCAGAACATCACCGGCTTCATGGTCGGCCGCAAATACGAGGCGGAGGGCATCGCCAAGCATGGCGCCAAGCTCGTCACTGCGGTCGCGACCGCAAGCGTGCCGAAGATCACGGTGCTGATCGGCGGCTCCTACGGCGCGGGCAATTACGGCATGTGCGGCCGGGCCTATTCGCCGCGCTTCCTCTGGACCTGGCCGAACAGCCGCATCGCCGTCATGGGCGGCGAGCAGGCGGCCGGCGTGCTGGCGACCGTGAAGCGCGAGGGCATCGAGCGGGCGGGCGGAAGCTGGAGCATCGAGGAGGAAGCCGCCTTCAGGCAGCCGACCATCGACATGTTCGCCCGCCAGAGCCACCCGCTCTATGCCTCGGCAAGGCTATGGGACGACGGCATCGTCGATCCGCGCCGGACGCGCGACGTCCTGGCGCTCTCGCTCTCGGCGGCGCTCAACGCGCCCGTCGAGCCCACCCGTTTCGGCGTCTTCAGGATGTAG
PROTEIN sequence
Length: 318
VKAATGEVVTAEDLGGGDVHTRLSGVADHLARDDRHALAIARGIAANLNTHKPPVVRSGAGDAPVYDPEELLGIVPADTRTPYDVREVIARVVDGSRFDEFKARFGTTLVCGFAALHGLPVGIVASNGVLFSEAALKGAHFIELCAQRSIPLLFLQNITGFMVGRKYEAEGIAKHGAKLVTAVATASVPKITVLIGGSYGAGNYGMCGRAYSPRFLWTWPNSRIAVMGGEQAAGVLATVKREGIERAGGSWSIEEEAAFRQPTIDMFARQSHPLYASARLWDDGIVDPRRTRDVLALSLSAALNAPVEPTRFGVFRM*