ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6416_curated_16

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 18246..19103

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SJ01_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 263.0
  • Bit_score: 289
  • Evalue 3.00e-75
Uncharacterized protein {ECO:0000313|EMBL:AHB50065.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 263.0
  • Bit_score: 289
  • Evalue 4.20e-75
phage-related tail protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 262.0
  • Bit_score: 257
  • Evalue 5.20e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGGCAGCAACCACGTTAACATCGTCACTCGTCGTTCGCCTCATCGACCAGGTCACCGCGCCCGCCCGCGCGGTGACGAAGTCACTCCTCGGCCTGAACAAGGCGGCCGGCGGAAACTTCGGCGACCGTCTGCGCACAGCAATCGACAACAACAATGCGGCGCTCGACCGGGCGCGCGGCGGGATGGTCGATGCCGTCGCCGGCTTCTACCTGCTCAAGCAGGCCCTCGGCGCGCCCATCAAGAACGCGATGGATTTCGAAAGCGCCATGGCGGATATCGCCAAGGTCTCGGGCTTCGACACGAAGGGGCTCGACGAGTATGGCAAGCGGCTGCGCAAGCTGGCCGTCACCGAAATTCCGCTCGCCGTGAACGACCTCGCAGCACTGTCGGCCGCCGCCGCGCAAGCGGGCGTGCCGGACGAAGACCTCTTCGATTTCACGCGCCTGGTCGCGAAGGCCGCGGTCGCTTGGGAAATGAGCGGCGCCGAGGCCGGCGAGGCTCTCGCCAAAATCCGCACCGCTCTCGGCCTCACCAACGAGCAGACCGCCGCTTATGCCGACGCGGTCAATTTCGTGTCGGACGCCACGGCGGCGAGCTCGCGCGACCTCATCGACTTCACGAAGCGTGTCGCCTCGCAAGGCGAATTCTACGGCTTCGCGAAGGAGCAAACGCTTGCATTCGGCGCGGCCATGATCTCGGCCGGCGCAGAGAGCGAAGTGGCGGCGACGTCGTTCCGCAACATGGGCCGCGCCCTCACCAAGGGCGCGAGCGCGACGAAATCGCNNNNNNNNNNNNNNNNNNNNNNAAGGTCGTCGAGCAGCTCGGCCAGCTTCCGGAGCATATGCAGGCATCGGTGA
PROTEIN sequence
Length: 286
MAATTLTSSLVVRLIDQVTAPARAVTKSLLGLNKAAGGNFGDRLRTAIDNNNAALDRARGGMVDAVAGFYLLKQALGAPIKNAMDFESAMADIAKVSGFDTKGLDEYGKRLRKLAVTEIPLAVNDLAALSAAAAQAGVPDEDLFDFTRLVAKAAVAWEMSGAEAGEALAKIRTALGLTNEQTAAYADAVNFVSDATAASSRDLIDFTKRVASQGEFYGFAKEQTLAFGAAMISAGAESEVAATSFRNMGRALTKGASATKSXXXXXXXXRSSSSSASFRSICRHR*