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SCNpilot_expt_1000_bf_scaffold_17579_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(7373..7849)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 158.0
  • Bit_score: 315
  • Evalue 8.90e-84
  • rbh
Plasmid pSYMA complete sequence n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P9A4_RHIML similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 158.0
  • Bit_score: 315
  • Evalue 2.80e-83
  • rbh
Putative xylanase/chitin deacetyase {ECO:0000313|EMBL:EYR79432.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 158.0
  • Bit_score: 311
  • Evalue 7.50e-82

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
GCCACGCTCGACCTGCTGATCGACGAGGGCTTCACCTATGACGCCTCGCTGTCCGGCGACGACGTGCCCTACCTCATCCGCAGCGGGAAGGGCGCGCTCCTGGAGCTGCCGTCGGACCACGCGCTGGACGACTGGCCGCAATATGTGAACATGCGCGATTTCAACCACATGCTGCCGATCCAGTCGCCGGAACAGGCCATGCAGGTCTTCCGCTCCGAATTCGACGCGGCCTGGGCGAATGGCGGCCTGTGGTCCTCCGTCTGGCATCCGTTCGTGTCGGGCCGCCCGGCCCGCGCGCAGGCCATGGCCGATCTCATCGAATACATGCAGGCGAAGGGAAACGTCTGGTTCGCCCCGATGGAGGAGATCGCCGCCCATGTGCAGGGCCTCGTCGACAGCGGCGAATGGACGCCGCGCGAGGAGACGCTGCCCTTCTGGCAGCAGCCCGTACCGCAGATCGCCCGCCCCGTGCGCTAG
PROTEIN sequence
Length: 159
ATLDLLIDEGFTYDASLSGDDVPYLIRSGKGALLELPSDHALDDWPQYVNMRDFNHMLPIQSPEQAMQVFRSEFDAAWANGGLWSSVWHPFVSGRPARAQAMADLIEYMQAKGNVWFAPMEEIAAHVQGLVDSGEWTPREETLPFWQQPVPQIARPVR*