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SCNpilot_expt_1000_bf_scaffold_17579_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_17579_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..677
DNA (675bp) protein (225aa)
Glucokinase GlcK n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CER3_9RHIZ rbh
Glucokinase GlcK {ECO:0000313|EMBL:EYR77859.1}; EC=2.7.1.2 {ECO:0000313|EMBL:EYR77859.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glucokinase; K00845 glucokinase [EC:2.7.1.2]
SCNpilot_expt_1000_bf_scaffold_17579_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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688..1746
DNA (1059bp) protein (353aa)
Glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EW45_9RHIZ rbh
Glucosamine--fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:EYR77860.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
sugar isomerase (SIS); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
SCNpilot_expt_1000_bf_scaffold_17579_curated_3
unknown

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2161..2529
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_17579_curated_4
unknown

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4048..4833
DNA (786bp) protein (262aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_17579_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4854..5636)
DNA (783bp) protein (261aa)
Amino acid ABC transporter ATP-binding protein, PAAT family {ECO:0000313|EMBL:EYR79429.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glnQ1; glutamine transport ATP-binding protein GlnQ rbh
Glutamine transport ATP-binding protein GlnQ n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P442_RHIML rbh
SCNpilot_expt_1000_bf_scaffold_17579_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5633..5980)
DNA (348bp) protein (116aa)
L-cystine transport system permease protein TcyB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDF8_9RHIZ
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EYR79430.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_17579_curated_7
unknown

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6159..6326
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_17579_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6478..7272)
DNA (795bp) protein (265aa)
Glutamine-binding periplasmic protein GlnH n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMT3_9RHIZ rbh
ABC-type amino acid transport periplasmic component {ECO:0000313|EMBL:EYR79431.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
amino acid ABC transporter substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_17579_curated_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7373..7849)
DNA (477bp) protein (159aa)
hypothetical protein rbh
Plasmid pSYMA complete sequence n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P9A4_RHIML rbh
Putative xylanase/chitin deacetyase {ECO:0000313|EMBL:EYR79432.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Displaying 9 items

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