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SCNpilot_expt_1000_bf_scaffold_17579_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5633..5980)

Top 3 Functional Annotations

Value Algorithm Source
L-cystine transport system permease protein TcyB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDF8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 115.0
  • Bit_score: 222
  • Evalue 2.40e-55
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EYR79430.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 115.0
  • Bit_score: 222
  • Evalue 3.30e-55
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 115.0
  • Bit_score: 217
  • Evalue 2.40e-54

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGCTGGCCGTCGACATCGGCCAGTACGAGGCGGCCAAGTCGATCGGCATGACCTATTCCGACACGTTGCACCGCATCATCCTGCCGCAGGCGATGCGCGTGGTCGTGCCGCCGCTCGGCAACGAGTTCATCGGCCTGCTGAAGGTGACGGCGCTTGCCAGCATCATCGGCTTCGGCGAACTGCTCGGAACGGCCCAGGACATCTATTACAGCAACGCCAAGATCATGGAGATGCTGTTCGTCGCCACCATCTGGTACCTGGTGATCGTATCCCTCCTTTCCGTCGTGCAGATGTGGATCGAAAAGCGTTTCGCGCGCGGCTTCGCAAGCAGCGGGAGGCACGGATGA
PROTEIN sequence
Length: 116
MLAVDIGQYEAAKSIGMTYSDTLHRIILPQAMRVVVPPLGNEFIGLLKVTALASIIGFGELLGTAQDIYYSNAKIMEMLFVATIWYLVIVSLLSVVQMWIEKRFARGFASSGRHG*