ggKbase home page

scnpilot_solids1_trim150_scaffold_974_14

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(20060..20962)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B340D similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 298.0
  • Bit_score: 501
  • Evalue 5.30e-139
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL94642.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 300.0
  • Bit_score: 437
  • Evalue 1.70e-119
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 297.0
  • Bit_score: 294
  • Evalue 4.00e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGCGTTTGCGCTACATCGAACTCTTCCATGCCGTACTCACCACGGGCAGCCTGACCGGGGCGGCGAAGTTGCTCAACATCTCGCAGCCTGCGGCCAGCAAGGCATTGCAACACGCCGAGGACAAGCTCGGCTTCGCCTTGTTCAGCCGCGTCCGCGGGCGCCTGCAGCCGACCCAGCAGGCGCTGCAGCTGCGCGACCGCATCGAGAAAATCATCCAGGACGTGCACGAGCTGCAGCGCCTCACCACCAACATGGGCCAGCCGGGAAGCTGTCCGTTGCGGGTGACCTGCACCCCGACGCTGGCCCAGGTGCTGTTGCCCGCGGCGAGCGTGCTGTTGCGCAAGGCGTTCACGGACGTGACCGTCGAGTTGTCCACCCAGCACTCGGCGGTGATGTGCGAGTCGCTGACCCTGCGCGAAACGGACATCGGCCTCACCCTGCAGGACACCGGGCACCAGACCTTGCGCCAGAAGGTGCTCTGCCGTGGGCAGGTCATGGTGATCGCGCCGCCCGGTTGGTGGCCGGAAGCGGAGCTGGCGCAACCGCTGCCGATCAATGCGCTGGCCAGCCAGCCCATGATCGGCATCGCCGTGCGCGACGCGTTGGGGAGCATGCTGCAAACCCATCTTTCGCAGGTTTCCCCCACGCCGCAGATCACGGTGTCGGTGCAAACCTACCAGTTGGCCCATTCGCTGGTCGCGAAGGGCGAGGGCCTGGCCATGGTCGATCCGTTCACTGCGCGCTGCGGCAGCGCGAACAGCGTGCAGATGCGTCCGTTGAAACCGCACCTCGATGTCGTGCTGTACGCGATGTACCGACCCGACAGTCCGTTGAATCCGGTGCAGAAGCGTTTCCTCGACCTGGTGAAGCAACTCGCGCAGCGGATGCTGGCAGGCGCCTGA
PROTEIN sequence
Length: 301
MRLRYIELFHAVLTTGSLTGAAKLLNISQPAASKALQHAEDKLGFALFSRVRGRLQPTQQALQLRDRIEKIIQDVHELQRLTTNMGQPGSCPLRVTCTPTLAQVLLPAASVLLRKAFTDVTVELSTQHSAVMCESLTLRETDIGLTLQDTGHQTLRQKVLCRGQVMVIAPPGWWPEAELAQPLPINALASQPMIGIAVRDALGSMLQTHLSQVSPTPQITVSVQTYQLAHSLVAKGEGLAMVDPFTARCGSANSVQMRPLKPHLDVVLYAMYRPDSPLNPVQKRFLDLVKQLAQRMLAGA*