ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids1_trim150_scaffold_1735_5

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(7300..8064)

Top 3 Functional Annotations

Value Algorithm Source
two-component system response regulator protein; K02477 two-component system, LytT family, response regulator similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 261.0
  • Bit_score: 183
  • Evalue 6.50e-44
lytT; sensory transduction protein lytT; K02477 two-component system, LytT family, response regulator id=24658805 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 261.0
  • Bit_score: 183
  • Evalue 2.10e-43
Sensory transduction protein lytT {ECO:0000313|EMBL:CBH25993.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.8
  • Coverage: 261.0
  • Bit_score: 183
  • Evalue 2.90e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 765
ATGATCCGCGCCTTGATCGTCGATGACGAGCCGCCCGCGCGCGCGCAGGTGCGCGAGTTCCTCATGGACGAACCCGATGTCAACGTGCTCGGCGAAAGCGGCGATGGCCGCAGCGCGCTGGAGCAGATCCGACGGCTTGATCCCGACCTCGTGTTCATGGACATTCGCATGCCGCGAATGTCGGGCCTGGAAGTGCTGCAGTCGGAGGCGAAGCTGCCATACACCATTTTCACCACGGCGTACTCCGACTATGCCGTCGAGGCGTTTTCAGTTGACGCGCTCGATTACCTGGTCAAGCCGCTCGAGCGACGCCGCTTCCGGCAGGCGGTCGAACGCGCACGGCGCTATCTGGAACGCGACGCCACGCTTTTGCGCCGGATCGATCCTGCAACATTGCAGGCCTTCCTAGCCAGCATCAGTGCCGCCAGCCATCGCTGCGATCGGTTGCCGGTGAAGATTGGTCGCACCACACAGATTTTCGACACGGACATGATCGAATTCGTGGAGGCGGATGGCGATTACGCCGCCATCCATCACAAGGGCGGCGGCTTGGCTCGAACTCGCGAGGGCATTGCGACCCTGGAGACGCGGCTGCCGGCTGGCCGATTCGTCCGCATCCACCGCTCGCTCATTGTCAATCTGGATTGTGTACGCGAAGTGCGCTCCAACAAGCACGGGGGCTTCAGTTTGGTGATGGCTTCAGGGCACAAGTTGAAGAGTGGCGCCAAATACGACGATTCCCTCAGGAAATTCGTCGAAAACTGA
PROTEIN sequence
Length: 255
MIRALIVDDEPPARAQVREFLMDEPDVNVLGESGDGRSALEQIRRLDPDLVFMDIRMPRMSGLEVLQSEAKLPYTIFTTAYSDYAVEAFSVDALDYLVKPLERRRFRQAVERARRYLERDATLLRRIDPATLQAFLASISAASHRCDRLPVKIGRTTQIFDTDMIEFVEADGDYAAIHHKGGGLARTREGIATLETRLPAGRFVRIHRSLIVNLDCVREVRSNKHGGFSLVMASGHKLKSGAKYDDSLRKFVEN*