ggKbase home page

scnpilot_solids1_trim150_scaffold_2315_10

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(5010..5375)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator merD n=2 Tax=Rhodocyclaceae RepID=F5RFN2_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 121.0
  • Bit_score: 178
  • Evalue 5.40e-42
Transcriptional regulator {ECO:0000313|EMBL:EPZ14118.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 121.0
  • Bit_score: 178
  • Evalue 7.60e-42
transcriptional regulator MerD similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 121.0
  • Bit_score: 173
  • Evalue 5.50e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thauera terpenica → Thauera → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGAACGCCTATACGGTGTCCCAGCTGGCCCATGATGCCGGTGTGAGTGTGCATGTAGTGCGCGACTACCTGCTGCGTGGATTGTTGCGGCCGGTGGATCACACCGCTGGCGGCTACGGCTTGTTCGATGCGGAGGCGTTGCAGCGGTTGTGCTTCGTTCGGGCCGCCTTTGAAGCGGGCATCGGCCTCGACATATTGACGCGGCTATGCCGAGCTCTGGATGTCGCAAACGGCGATGAAGCGGTGGCGCGGCTTGCTGAGCTGCGCCACCTCGTGGAGCGTCGGCGTCAGGCGCTAACCGACCTGGAAGCGCAGTTGACCTTTCAGCTCACCGAGCTGGCACGCGACGCGGAGGTCTCGCCATGA
PROTEIN sequence
Length: 122
MNAYTVSQLAHDAGVSVHVVRDYLLRGLLRPVDHTAGGYGLFDAEALQRLCFVRAAFEAGIGLDILTRLCRALDVANGDEAVARLAELRHLVERRRQALTDLEAQLTFQLTELARDAEVSP*