ggKbase home page

scnpilot_solids1_trim150_scaffold_2106_5

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(6338..7645)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036F3BC2 similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 408.0
  • Bit_score: 502
  • Evalue 5.90e-139
  • rbh
Sphingomonas taxi strain 30a NODE_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30225.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 408.0
  • Bit_score: 496
  • Evalue 3.50e-137
two component sigma54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 454.0
  • Bit_score: 264
  • Evalue 8.40e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1308
ATGATCAAAGCTGTTTTTGAAGATCGAGAGAGCAGCGCGCGTCCGCGTCCGGTCACAGTGTCCGGGGATGGACAGTCGCAGGGGACGTCAAGAGGCGCTTCGGTTCTGCTGGTGGACGACAATACGGTGGTGGCCCGGGCGATGGAGATCGCTTTTCAGGTGGCGGGCCATCGCCTGGAGTTCGCGCCGGGACCGCAGGAGGCGCTGTCGCGTCTGGCCTCCGCGCGATACGACGCCGTGCTGCTGGACATGAATTTCGGCCCCGGCGAAACGAGCGGCGAAGAAGGACTGGCCTGTCTGCGGCGGATCATGGCGGATGATCCGACGGCCTGTGTCGTGGTCATCACCGCCCATAGCGGCGTCGGCATCGCGGTGGCGGCCATGCAGGCGGGGGCGCGCGACTTCGTCATGAAACCCTGGCGCAATCGCGACCTGATCGCCAAGGTCGAGGCCGCGATCGCCCGCCGTGCGCCCATTGAAACGCCGTCGGCGCCGCCTGCCGTGAGCGAGGCCGCTCCGGCGCGGCTGTTGGGCGACAGCGCCGCCGTCCAGCGATTGCGCGATCTGATCCGCCGCATCGGCCCGACGTCGGCCAGCGTCGCGGTGGTCGGACCGTCGGGGGCGGGGCGCACCTTGGCGGCCAGGGCGATCCACGCGGCTTCGCCTTTGGCCGATCAGCCACTGCGCAAGATCGACCTGCGCGATCCGGCCGCCTGGCGCTTCGATCCGGAAGAGGGGGCGGTTATCCTGCGTCATGCGGAGGCTCTGGACGACGTGGCGCAGTCGCGGCTGTTGGATCAACTGCCTCCGACGCTGCGTTGCTTCAGCCTGCTTTCAGGAACGACCGGCTTGTCTGCGGCCTTGCGGCGGCGGCTGGCGACGGTCGAGGCGGCTGCGCCTCCGCTGGCGGAGCGCGAGGACGACGCCGTCATCCTGGCCCGCCACTTCGCGCGCGAGGCGTCCGAGCGGTTCGGCCGCCCGGCCGCGCAACTGACCCCTGGGGCGGAGGCGGCGATCCGCGCGGCCGCGTGGCCCGACGAGGCGCGCGGTCTGGCCCTGGCGGTCGAGCGCGCGGTGCTGCTGTCGGAGGACGGAAAGATCGAGGCGGCCGCCGTCGTCGCTCCGCTGTCGCCGGTGTCGGATGCGCTGGATACGCCTGCCGACAACGCTTTTGATCTCGGCGACGCCGAGAAGGCGATCATCGCCGCGGCGTTGCGTGAACATCGGCACAATGTCTCTCAGACGGCGGCGGCCCTGGGGCTGAGCCGGGGGGCGCTCTATCGGCGCATGGCCCGTCATGGTCTCTAG
PROTEIN sequence
Length: 436
MIKAVFEDRESSARPRPVTVSGDGQSQGTSRGASVLLVDDNTVVARAMEIAFQVAGHRLEFAPGPQEALSRLASARYDAVLLDMNFGPGETSGEEGLACLRRIMADDPTACVVVITAHSGVGIAVAAMQAGARDFVMKPWRNRDLIAKVEAAIARRAPIETPSAPPAVSEAAPARLLGDSAAVQRLRDLIRRIGPTSASVAVVGPSGAGRTLAARAIHAASPLADQPLRKIDLRDPAAWRFDPEEGAVILRHAEALDDVAQSRLLDQLPPTLRCFSLLSGTTGLSAALRRRLATVEAAAPPLAEREDDAVILARHFAREASERFGRPAAQLTPGAEAAIRAAAWPDEARGLALAVERAVLLSEDGKIEAAAVVAPLSPVSDALDTPADNAFDLGDAEKAIIAAALREHRHNVSQTAAALGLSRGALYRRMARHGL*