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scnpilot_solids1_trim150_scaffold_6_16

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: comp(15887..16768)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UGP0_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 291.0
  • Bit_score: 240
  • Evalue 2.10e-60
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 291.0
  • Bit_score: 240
  • Evalue 6.70e-61
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABR62820.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 291.0
  • Bit_score: 240
  • Evalue 3.00e-60

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGGCCAACGTTACATTGAAGCAATTGAGAACCTTTGTCGCCGTGGCGGAGTGCGGTCGTTTCCGCCTCGCGGCGGAAGCTGTAAATCTTACGCAATCGGCGGTCAGCATTCTGATCAAGGAATTGGAGGGGCAGCTTGGAACCAGCCTGTTTGACCGGCACACGCGCTTCGTGGGATTGACCGACGCCGGCAAGCGATTACTGCCTCTCGCCATCGATATCCTCGAACGCGTCGATAGCGCGGTCGATTCGATGGTCGACATAACCACGCTTAAGACCGGGCGCGTGACCATCGCTTCGGCCACCGTTCTTGCCGCGACCTTCCTTCCAAGCCGCATTGCCAGCTTCATGCGAAACCATCCGGAAATTCGCATTGATCTGCGAGATGTATCCGAAGACGAAATACGAACCCTGCTAATCGATGGAGAAGCGGATATCGGCGTCGGCACCAGCAGGTTCAGCGAGCAGGAAATCAACGAGCACACGCTTTTCGCGGACCATCTCGCGCTCTTCTGCCCGGCCAACGATCCTTTGGCGGCAAAGGAAACCGTAGAATGGGCTGATTTCAACAATCGCCCCTTTATCGCCCTGACGCCCGAGAATCCGTTGCAACGACGGATCGACCAACTCCTGGAGGCGAACGGGGTCATGGCTCGCCGTCAATTCAGCGTCCGTTTCTCGGCGACGTTGCTTGCCCTGGTCAATGAAGGGCTCGGCATAGGGATACTGCCCGCCGGGTCCGAAGGCCTGTCTCCGATGGTCAACATCGTGATGCGGCCGATAACAGACCAGATCGCCTCCCGAAACGTCGTCGCGCTGACCCTGCGCGAACGAACGCTCAGTCCGGCCGCCCGCAGTTTCTTCCTGCACCTCACGGGTTAA
PROTEIN sequence
Length: 294
MANVTLKQLRTFVAVAECGRFRLAAEAVNLTQSAVSILIKELEGQLGTSLFDRHTRFVGLTDAGKRLLPLAIDILERVDSAVDSMVDITTLKTGRVTIASATVLAATFLPSRIASFMRNHPEIRIDLRDVSEDEIRTLLIDGEADIGVGTSRFSEQEINEHTLFADHLALFCPANDPLAAKETVEWADFNNRPFIALTPENPLQRRIDQLLEANGVMARRQFSVRFSATLLALVNEGLGIGILPAGSEGLSPMVNIVMRPITDQIASRNVVALTLRERTLSPAARSFFLHLTG*