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scnpilot_solids1_trim150_scaffold_400_5

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: comp(4732..5277)

Top 3 Functional Annotations

Value Algorithm Source
TRAP dicarboxylate transporter, DctP-like subunit n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B456_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 36.9
  • Coverage: 176.0
  • Bit_score: 109
  • Evalue 3.50e-21
TRAP transporter {ECO:0000313|EMBL:KJR61670.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 154.0
  • Bit_score: 110
  • Evalue 2.20e-21
TRAP dicarboxylate transport system, small permease component (DctQ-like) similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 161.0
  • Bit_score: 107
  • Evalue 5.50e-21

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Taxonomy

Azospirillum thiophilum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGTCGTCATTTCTTGAGGGGCGCGTCTTGCCCTTGGCTGATCGCATGGATGGCGCGATCAAGAAGATTTCTGCGGTGGTCATCTATCTGACAACCGGAATTCTGCTAGTCGCGCTGACCCTGAACGTCATTTTTCGATACATCCTGCCGGGCGGCGGCCTGAATTGGCTGAACGAGCTGCCTGAGCACTTCTTTCCTTGGATGATCGCCGCCGGAGTCATTCTGGCGGCCCAGCATAACGCGCACATCGCGGTGGACTTCGTGATCCAGTCCCTGCCAGCGCGGGCGGCACGGGTGCTGGCGATTTCCATCCAGGTGCTTCTCGCAATAACCTATCTGATATTCGCCAAGGTCGCGTTGAACGTGTCCGAAATCGTTTCGGTCGAGTACAGTTCGCTGCTCCATATCTCCCGCAGCTACGCCTATTACGCGCTGGTCTTCCTCGCGGTGGGGGTCTTCCTGACCAGCCTGTCCTTCATCCTCCGGATTTGCCTGTTCGGCCTCCAGGGACTGCCCGAGCCCAATGCAGAGGAGAGCATCGTATGA
PROTEIN sequence
Length: 182
MSSFLEGRVLPLADRMDGAIKKISAVVIYLTTGILLVALTLNVIFRYILPGGGLNWLNELPEHFFPWMIAAGVILAAQHNAHIAVDFVIQSLPARAARVLAISIQVLLAITYLIFAKVALNVSEIVSVEYSSLLHISRSYAYYALVFLAVGVFLTSLSFILRICLFGLQGLPEPNAEESIV*