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scnpilot_solids1_trim150_scaffold_400_6

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: comp(5304..6299)

Top 3 Functional Annotations

Value Algorithm Source
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Rhizobium sp. AP16 RepID=J2DEK1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 334.0
  • Bit_score: 411
  • Evalue 1.00e-111
  • rbh
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:GAK72815.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 329.0
  • Bit_score: 417
  • Evalue 1.60e-113
TRAP dicarboxylate transporter substrate-binding protein DctP subunit similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 334.0
  • Bit_score: 410
  • Evalue 7.20e-112
  • rbh

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGACTGTGGTGTTGAATCGGCGCGCCTTTCTCGGTGCGAGTGCCGCGCTTTGCGGAAGTTTTGCCATCATCGGAAAAGCATCTGCCGCGACAACCATGACTTTTGGTCACGGAGCCGCGCCGGGGAACCCGCGGGCCGTCGCAGCGGACAAGTTCGCCGAACTCGTCAAGCAGAAGACGAACGGGGCAGTGGAAATCCGGGTCGCGGGATCGGAGCAACTCGGCAACGACGTTGCCATGCTCACCAGCTTGCGCACGGGAAGTCTCGATTTCACGGCAAACAGCCAGGGCCCGGTTTCCGGCATCGTGCCGGAAGTCGGCGCACTCGGCCTTCCTTTCCTGTTCGCTGACGCAGCGGCCGCCTTCAGGGTGCTGGACGGAAGCATCGGGGAGACGCTGGCGGCGAAATTCGATCCTCTCGGCATCATACCGTTGAGCTGGTGGGACAACGGCGTGCGCCAGATCTCGAACACGAAGAAGTCGATCAACGTGCCTGACGATCTCAAGGGCATGAAAATCCGCACGCCCGCGGATCCGATGACGATCGATATCTTCGAAGCGCTCGGTGCATCGACGGAACAGATTGCTTTCTCCGAACTCTATGTCGCCTTGCAGCAAGGCGTCGTGGACGGGCAGGAAAATCCGTTGGCAAACATCGCCAGCGCGAAACTATACGAGGTGACGCCGTACATCTCGATGTCCTCCCACAAATGGGAGAGCACACCTTTCCTGATGTCAAAGATCGCCGCCGCGCGTTTGAACGAGGACCAGATGAAAGCGGTCAAGGAAGCCGCCAAAGAGGCGGGCGATCTTCAGCGCCAGCTCATGCAGGAAGCCGACGCGAAATATCTGAAGCAGTTCAAGGACGACAAGTCGCTCACGGTCAACGTGCCGGATCGCGATGCGCTTCGGAAGGCGACGGCCAGCGTCTACGACAAGTGGGAAGCTAAACCGTTTGGCGATTTCGTGAAGCAACTCGTATCGGCTGTCGGCTAG
PROTEIN sequence
Length: 332
MTVVLNRRAFLGASAALCGSFAIIGKASAATTMTFGHGAAPGNPRAVAADKFAELVKQKTNGAVEIRVAGSEQLGNDVAMLTSLRTGSLDFTANSQGPVSGIVPEVGALGLPFLFADAAAAFRVLDGSIGETLAAKFDPLGIIPLSWWDNGVRQISNTKKSINVPDDLKGMKIRTPADPMTIDIFEALGASTEQIAFSELYVALQQGVVDGQENPLANIASAKLYEVTPYISMSSHKWESTPFLMSKIAAARLNEDQMKAVKEAAKEAGDLQRQLMQEADAKYLKQFKDDKSLTVNVPDRDALRKATASVYDKWEAKPFGDFVKQLVSAVG*