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scnpilot_solids1_trim150_scaffold_79_16

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 14394..14966

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036D4839 similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 173.0
  • Bit_score: 227
  • Evalue 1.20e-56
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 190.0
  • Bit_score: 225
  • Evalue 5.00e-56
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 192.0
  • Bit_score: 224
  • Evalue 3.20e-56

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Taxonomy

Mesorhizobium amorphae → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
TTGGCAAAGCTTGAAAACCCGGTCCAGATGGCCGTCATCGGCGCCGCCCACGGCATAAAGGGCGAGGTGCGCGTCAATATCTTCACCGGCGATCCGGCGGCGCTCGGTTCCTACGGGCCGCTCCGGGACAAGACCGGGCGCATTTTCGAAATTGTCTCCGTGCGCCCTGCAAAGGAGGTTTCGATCGTCCGCTTGAAGGACGTTGCGACCCGGGAGGCGGCCGAGGCGCTGAACGGCACGGCGCTCTTCATCGACCGCTCGGCCTTGCCGGCCGATCTCGAGGAGGAAGAATTCTACCATGCCGACCTGATCGGCCTCGCGGTCCGCGACGAGAAGGGCGCGGAGATCGGCACCGTCGCCGCGATTCATGATTTCGGGGCGGGCGATATTCTCGAAGTCGCGCGGAAGGATGGACCGTCGGTAATGGTCCCCTTCACCCGCGCTGCCGTGCCCGAAGTCGCGCCGGGACAGGGCTTCGTCCGTATCGACAGTCTGGCGGCGGGGCTTGTGGAGGAAGAGGAGCCGCATGAAAATACCGGTGCGCGCAGCGGGAACAGGACAAAACGGCGATGA
PROTEIN sequence
Length: 191
LAKLENPVQMAVIGAAHGIKGEVRVNIFTGDPAALGSYGPLRDKTGRIFEIVSVRPAKEVSIVRLKDVATREAAEALNGTALFIDRSALPADLEEEEFYHADLIGLAVRDEKGAEIGTVAAIHDFGAGDILEVARKDGPSVMVPFTRAAVPEVAPGQGFVRIDSLAAGLVEEEEPHENTGARSGNRTKRR*