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scnpilot_solids1_trim150_scaffold_79

Search features with annotation key words

Displaying items 1-30 of 242 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_79_1
unknown

Not on your lists

3..92
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_79_2
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113..439
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQC0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM71772.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_79_3
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(362..1507)
DNA (1146bp) protein (382aa)
Patatin n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CNP8_9RHIZ
Patatin {ECO:0000313|EMBL:KFL26608.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
patatin/phospholipase-related protein
scnpilot_solids1_trim150_scaffold_79_4
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1757..3157
DNA (1401bp) protein (467aa)
Polysaccharide biosynthesis protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGG4_9RHIZ rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDX13644.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
polysaccharide biosynthesis protein rbh
scnpilot_solids1_trim150_scaffold_79_5
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3154..4281
DNA (1128bp) protein (376aa)
Group 1 glycosyl transferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGG5_9RHIZ rbh
Group 1 glycosyl transferase {ECO:0000313|EMBL:CDX13646.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
glycosyl transferase, group 1 rbh
scnpilot_solids1_trim150_scaffold_79_6
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4295..5803)
DNA (1509bp) protein (503aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGG6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX13647.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_79_7
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5968..7170
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGG7_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHH09189.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_79_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7221..8438)
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGG8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX13651.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
monooxygenase, FAD-binding protein rbh
scnpilot_solids1_trim150_scaffold_79_9
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8435..9220)
DNA (786bp) protein (262aa)
UDP-hexose transferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW45_RHITR rbh
UDP-hexose transferase {ECO:0000313|EMBL:CDX13654.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UDP-hexose transferase rbh
scnpilot_solids1_trim150_scaffold_79_10
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9572..10516)
DNA (945bp) protein (315aa)
Aldo/keto reductase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JQ2_MESSB rbh
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:ABG62373.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids1_trim150_scaffold_79_11
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(10568..10975)
DNA (408bp) protein (136aa)
hypothetical protein; K01500 [EC:3.5.4.-]
Cytidine deaminase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ERK0_BRASB
Tax=RBG_16_Chloroflexi_68_14_curated
scnpilot_solids1_trim150_scaffold_79_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11262..12668
DNA (1407bp) protein (469aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Dihydrolipoyl dehydrogenase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FF49_9RHIZ rbh
scnpilot_solids1_trim150_scaffold_79_13
unknown

Not on your lists

comp(12860..13087)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_79_14
unknown

Not on your lists

comp(13183..13302)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_79_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13374..14312)
DNA (939bp) protein (313aa)
Tyrosine recombinase XerC n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAZ7_9RHIZ rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
xerC; site-specific tyrosine recombinase XerC; K03733 integrase/recombinase XerC rbh
scnpilot_solids1_trim150_scaffold_79_16
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14394..14966
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036D4839
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM
scnpilot_solids1_trim150_scaffold_79_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14963..15673
DNA (711bp) protein (237aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL77_9RHIZ
tRNA (guanine-N1)-methyltransferase
scnpilot_solids1_trim150_scaffold_79_18
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15693..16430)
DNA (738bp) protein (246aa)
UPI0003CE7A67 related cluster n=1 Tax=unknown RepID=UPI0003CE7A67 rbh
putative permease rbh
Membrane protein {ECO:0000313|EMBL:ESY82547.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
scnpilot_solids1_trim150_scaffold_79_19
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16638..17201
DNA (564bp) protein (188aa)
50S ribosomal protein L19 n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL78_9RHIZ
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
scnpilot_solids1_trim150_scaffold_79_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17344..17994
DNA (651bp) protein (217aa)
Type 11 methyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL83_9RHIZ
Type 11 methyltransferase {ECO:0000313|EMBL:EHK58567.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_79_21
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18143..18583
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J7K4_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM25176.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
scnpilot_solids1_trim150_scaffold_79_22
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18755..18883
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3A3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV10658.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_79_23
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18943..20352
DNA (1410bp) protein (470aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
isopropylmalate isomerase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] rbh
isopropylmalate isomerase n=1 Tax=Rhizobium loti RepID=UPI00036533FF rbh
scnpilot_solids1_trim150_scaffold_79_24
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20432..22246)
DNA (1815bp) protein (605aa)
ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLC6_9RHIZ rbh
Holdfast attachment protein C {ECO:0000313|EMBL:CDX49914.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter ATP-binding protein; K15738 ATP-binding cassette, subfamily F, uup rbh
scnpilot_solids1_trim150_scaffold_79_25
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22286..22921)
DNA (636bp) protein (212aa)
thiamine pyrophosphokinase; K00949 thiamine pyrophosphokinase [EC:2.7.6.2]
Thiamine diphosphokinase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CU9_MESSB
Thiamine pyrophosphokinase {ECO:0000313|EMBL:EZQ17554.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids1_trim150_scaffold_79_26
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23158..24672
DNA (1515bp) protein (505aa)
metalloprotease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FCC960
Metalloprotease {ECO:0000313|EMBL:EZQ17550.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
putative Zn-dependent protease
scnpilot_solids1_trim150_scaffold_79_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24690..25550)
DNA (861bp) protein (287aa)
RNA polymerase sigma factor n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLV5_9RHIZ rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor rbh
scnpilot_solids1_trim150_scaffold_79_28
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25845..26417)
DNA (573bp) protein (191aa)
CarD family transcriptional regulator n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C4G4_9RHIZ rbh
CarD family transcriptional regulator {ECO:0000313|EMBL:EIM76716.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
CarD-like transcriptional regulator
scnpilot_solids1_trim150_scaffold_79_29

Not on your lists

comp(26767..27105)
DNA (339bp) protein (113aa)
Ferredoxin n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPQ0_9BACT
Ferredoxin {ECO:0000313|EMBL:ADI16391.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
ferredoxin II; K05524 ferredoxin
scnpilot_solids1_trim150_scaffold_79_30
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27218..27592)
DNA (375bp) protein (125aa)
RNA-binding S4 domain-containing protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MDW4_9RHIZ
RNA-binding S4 domain-containing protein {ECO:0000313|EMBL:EKF18965.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
RNA-binding S4 domain-containing protein; K04762 ribosome-associated heat shock protein Hsp15
Displaying items 1-30 of 242 in total

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