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scnpilot_solids1_trim150_scaffold_30_24

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 33399..33905

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion lipoprotein, VC_A0113 family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDC8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 168.0
  • Bit_score: 226
  • Evalue 2.40e-56
Type VI secretion lipoprotein, VC_A0113 family {ECO:0000313|EMBL:EYR83990.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 168.0
  • Bit_score: 226
  • Evalue 3.40e-56
hypothetical protein; K11906 type VI secretion system protein VasD similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 166.0
  • Bit_score: 87
  • Evalue 4.20e-15

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGGTCCGCATTCTCCGGTTGTTGATGATCGTCGCGTTGGCGTTTGGCCTCGCGTCATGCGGCATGTTCGGCAAGAAGAAGCCGCCGGCGCAGGAAATCGAAATCAAGCCGGCGCCGCAAAACGCGGGCCTCGACTTCCTGGTCACCGCCTCGCCGCTGGTGAACCCGCAACCGGACGGGCAGCCCTCCCCGGCGGTGGTCCGCGTCTACCTGTTGTCGGGCGACACCGCGTTTGCCAACGCCAGTTTCCGCCAATTGTGGGAGAACGACGCCAAAACGCTGGGCCCGACAATGCTGGGCAAGGCGGAAGTCATCGTCCAGCCAGGCAGCGTCGCGCATGTCAAGGCGCCCATGGCGGAGGGAACGGTGCTGGTCGCGGTAGTCGTCGGCTTTCGCGACTTTCAAGACGCGAAATGGCGTGCGATGGTGCCGCTTCAGGGTGAAAAGAAGCTGAAATTGAAGGCGGACCTGAAATCGCTTTCGGTGGATCTCGGGCCACAGGATTGA
PROTEIN sequence
Length: 169
MVRILRLLMIVALAFGLASCGMFGKKKPPAQEIEIKPAPQNAGLDFLVTASPLVNPQPDGQPSPAVVRVYLLSGDTAFANASFRQLWENDAKTLGPTMLGKAEVIVQPGSVAHVKAPMAEGTVLVAVVVGFRDFQDAKWRAMVPLQGEKKLKLKADLKSLSVDLGPQD*