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scnpilot_solids1_trim150_scaffold_193_14

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 11708..12253

Top 3 Functional Annotations

Value Algorithm Source
Conjugative transfer signal peptidase TraF n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGG7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 181.0
  • Bit_score: 338
  • Evalue 4.70e-90
  • rbh
Conjugative transfer signal peptidase TraF {ECO:0000313|EMBL:EKS37473.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 181.0
  • Bit_score: 338
  • Evalue 6.60e-90
traF2; putative conjugal transfer protein TraF similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 181.0
  • Bit_score: 312
  • Evalue 6.60e-83

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
GTGAGCCGCGCCGGACTTCTTGTCGCGACCACGCTCGCGGCGCTCGGCGTCGGTTATCCGGGGCTCGCGCCTATGCCGGTCAAGCTGATCTGGAACGCATCGGCGAGCGTGCCGATCGGCTTCTATACGATCGACGTCGGTGGGCCATTCGAAGTCACCAACCTTGTCGCCGTCGACGCGCCCGAACCCCTTGCCACCTTCCTCGCCGAGCGCGGCTATCTGCCCAAGGGCGTGCCGCTGATGAAGCGTATCCTCGCCGTGTCTGGGCAGACCGTTTGCCGCTCCAACCTCATCATCTCGGTGGATGGCGTCGAGGTCGGCGCAGCGCTTGAGCGCGACCGCGCCGGCCGCGCACTGCCGGTCTGGCGGGGCTGCCGCCGCGTCCAGACCGGCAAAGTCTTCCTTATGAATTGGCGGGTTCGCGACAGCCTCGACGGCCGCTACTTCGGCCTGATCTCGACGGACCAGATCATCGGCCGCGCCGTCCCGATGTGGACCGACGAAGACGGCACCGGCCGCTTCGAATGGCGTGCGCCGACGCGCTGA
PROTEIN sequence
Length: 182
VSRAGLLVATTLAALGVGYPGLAPMPVKLIWNASASVPIGFYTIDVGGPFEVTNLVAVDAPEPLATFLAERGYLPKGVPLMKRILAVSGQTVCRSNLIISVDGVEVGAALERDRAGRALPVWRGCRRVQTGKVFLMNWRVRDSLDGRYFGLISTDQIIGRAVPMWTDEDGTGRFEWRAPTR*