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scnpilot_solids1_trim150_scaffold_887_3

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 2969..3703

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF61F7 related cluster n=1 Tax=unknown RepID=UPI0003CF61F7 similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 244.0
  • Bit_score: 393
  • Evalue 2.20e-106
Conjugal transfer protein {ECO:0000313|EMBL:EZQ14590.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 244.0
  • Bit_score: 457
  • Evalue 1.30e-125
type IV secretion system family protein similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 233.0
  • Bit_score: 177
  • Evalue 5.80e-42

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGAGAAGGATCGTTTTCACCCTCGCTTTCGCGCTCCTGTCTGGAAGCGCCATGGCGCAAATCGCCGTCATTGACGGCGCGAATCTCGACATTGCCCGGCAGAACGCCAAAAACACGAATTCCATCATGGATTCCAACAAGGACATTCTGGAAAAGAGCGAGCAGATCTTGCAGTCGCTGACCGGAAGCCGCGACGGGTCCCTCGGCATCGGGCAGATGGGCCTCGGCGGCAATATGTCGATCGCGCAAGCGCCCAGCTTCGGCTCGGTCCTCAACGGCGGTGCGCTGTCCTTCGGCGGGCTGTCTCCCGAGATCCAGAAAATCGCCGGTGCGGTCATCAACGGCCTGCAACTGGTGAAGCAGCTTGAGCAAGTGACCGGCGGTCAGAACAGCGCAATCAACAGTGCCTATAGCGGCAGCGTGAACGTCGCGTCGCTCTTAAGCGCGCTGACCTCGCAGGCGTCGCAAGGGGTGACGCAGCGCGAACAGTCGTTGCAATCCGCCAGCGGCCAGATCGGGCAATCCGAGGACGTGAAAGGCTCGGTCGATCAAAACACGCGCATGCAGCTTGAAAACGCACGCGCCGTTAACGAGTTGATCGGTGTTCAAAATGGCGCCGTCGCGGCGCTCAACGAGGAGATGAAAACACGGCTTCTCCGGCAAAGTCAGGTCCAGCGGATGATGACGCCGAGCGATGTCAATCCTTTCGAGAACTTCGGCAAGTCGGGGAACTGA
PROTEIN sequence
Length: 245
MRRIVFTLAFALLSGSAMAQIAVIDGANLDIARQNAKNTNSIMDSNKDILEKSEQILQSLTGSRDGSLGIGQMGLGGNMSIAQAPSFGSVLNGGALSFGGLSPEIQKIAGAVINGLQLVKQLEQVTGGQNSAINSAYSGSVNVASLLSALTSQASQGVTQREQSLQSASGQIGQSEDVKGSVDQNTRMQLENARAVNELIGVQNGAVAALNEEMKTRLLRQSQVQRMMTPSDVNPFENFGKSGN*