ggKbase home page

scnpilot_solids1_trim150_scaffold_2037_5

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_69_91

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(4269..5015)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J3W6_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 250.0
  • Bit_score: 302
  • Evalue 5.10e-79
  • rbh
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 250.0
  • Bit_score: 302
  • Evalue 1.60e-79
  • rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADP80599.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 250.0
  • Bit_score: 302
  • Evalue 7.10e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGGCCGGCAACACCGCGACACCCGGTCGTACGGTCACGTCCCGCGTGCTGGCCATCCTTGGTTCGTTCGACGCCCAGCACCGCTGCCTCGGCCTCGGTGAGATCGCCCGTCGCGCCGAGCTCTCGCTCACGACCACGCACCGACTGACCGGCGAACTCGCCGAGTGGGGCGCCCTGATGCGGGTGCCCGGCGGCTATGCCATCGGCTCGAAGCTCTGGGAACTGGGCCTGCTGGCCCCGGCCGAGTCCGACCTGCGGCAGATCGCCGCACCCTTCATCAACGACATCCACGCCGCCACCCGCGCCACCGTGCAGCTCGGTGTACGGGACGGCGCCGACGTGCTCTACCTGGCTCGCAGCGCCGGCCACGGCGACGTGGCGATTCGCAACGGCATCGGGTCGCGGCTCCCGCTGCACGCCACCGGCGTCGGCAAGGTGCTGCTGGCGCACGCCCCCGCGGATATCACGGGCGGGATCCTCTCCCGCCTGGATCGCATCACGCCGTACACCGTCACGCAGCCGGGGCGGCTGGCCCGCCAATTGCAGCAGATACGCATGGACGGCTACGCCACCACCGCCGAGGAGATGAGCCTGGGCGCCTGCTCGGTTGCCGTGCCCGTGGTGGATGCCGAGCACCGGGTGCGCGCCGCCATCGGTGTGGTGGTGCCGGATCTGGGACGCGATGTCGGTCGCTACGTGTCGGTGTTGTCGATCGCGGCGAACGGCATCGCCCGGCAGTTGAACTGA
PROTEIN sequence
Length: 249
MAGNTATPGRTVTSRVLAILGSFDAQHRCLGLGEIARRAELSLTTTHRLTGELAEWGALMRVPGGYAIGSKLWELGLLAPAESDLRQIAAPFINDIHAATRATVQLGVRDGADVLYLARSAGHGDVAIRNGIGSRLPLHATGVGKVLLAHAPADITGGILSRLDRITPYTVTQPGRLARQLQQIRMDGYATTAEEMSLGACSVAVPVVDAEHRVRAAIGVVVPDLGRDVGRYVSVLSIAANGIARQLN*