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scnpilot_solids1_trim150_scaffold_1403_2

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(2028..2642)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 204.0
  • Bit_score: 315
  • Evalue 1.50e-83
  • rbh
Ribosomal large subunit pseudouridine synthase A n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L096_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 204.0
  • Bit_score: 320
  • Evalue 1.50e-84
  • rbh
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:EED38108.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 204.0
  • Bit_score: 320
  • Evalue 2.10e-84

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Taxonomy

Stenotrophomonas sp. SKA14 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
GTGATCGGACTGCACTACATCGACGAGGCGCTGCTGGTGGCGGAGAAGCCCGCCGGCCTGCTCTCGGTACCCGGGCGCCTGCCGGAGAACCAGGACTGCCTGGTGGCACGCCTGCAGGCGTCGTATCCGGACGTGCTGACCGTGCACCGGCTGGACCAGGTGACGTCGGGTCTGATGCTGTACGCACGCGGCAGGCAGGTGCAGGCGGCCCTGTCGATGCAGTTCGAGCAGCGGCGGGTGCACAAGCGCTACCAGGCGGTGGTGGAAGGGCAGGTCGCGGGCGAGGCGGGCGAGATCGCGCTGCCGCTGATCTGCGACTGGCCGAACCGGCCCAGGCAGATGGTGGACCTTGAACGGGGCAAGCCGGCGCTGACCCGCTGGCGGGTGCTGGCGCGCGATGCGGGGCAGGCGTGGACCCGGGTGGAACTGGAACCGGTGACCGGGCGCAGCCACCAGTTGCGGCTGCACATGGCCAGTGCCGGCCATCCGATCGTCGGCGACGGCCTGTACGGCGCCCGGCCCGCGCCGCGCGTACAGCTGCATGCGTGCCGGCTGGACTTCGTGCACCCGCTGAGCGGGGTGGCGATGGCGTTCGTTTCCCCCAGCCCGTTCTGA
PROTEIN sequence
Length: 205
VIGLHYIDEALLVAEKPAGLLSVPGRLPENQDCLVARLQASYPDVLTVHRLDQVTSGLMLYARGRQVQAALSMQFEQRRVHKRYQAVVEGQVAGEAGEIALPLICDWPNRPRQMVDLERGKPALTRWRVLARDAGQAWTRVELEPVTGRSHQLRLHMASAGHPIVGDGLYGARPAPRVQLHACRLDFVHPLSGVAMAFVSPSPF*