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scnpilot_solids1_trim150_scaffold_1153_7

Organism: SCNPILOT_SOLID_1_TRIM150_Stenotrophomonas_70_20

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(5961..7037)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 337.0
  • Bit_score: 562
  • Evalue 5.50e-157
nifR3 family TIM-barrel protein; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 335.0
  • Bit_score: 560
  • Evalue 3.60e-157
  • rbh
tRNA-dihydrouridine synthase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CUX1_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 342.0
  • Bit_score: 562
  • Evalue 3.90e-157
  • rbh

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Taxonomy

Stenotrophomonas sp. SKA14 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGGCTGAAGCCACGCCCGCGCACCGGGCCGGCGCCGGCATCGGCGCCGCGCCGGGCACTACAATGCGCCGCATGCAGATCGGCCCCTACACCATCGCGCCCAATGTGGTGCTCGCGCCCATGGCCGGCGTCACCGACAAACCGTTCCGGCAGCTGTGCAAGCGGCTCGGCGCGGGCCTGGCCGCCTCGGAGATGACCATCTCCGACCCGCGCTTCTGGAATACCCGCAAATCCATCCACCGCATGGACCATGCCGGCGAGCCGGCGCCGATCAGCGTGCAGATCGCCGGCACCGAGCCGCGGCAGCTGGCCGAGGCCGCGCGCTACAACGTCGACCACGGCGCGCAGATCATCGACATCAACATGGGCTGCCCGGCCAAGAAGGTGTGCAATGCGTGGGCCGGCTCGGCGCTGATGCGCGACGAAGCGCTGGTGGCGCGCATCCTGGAGGCGGTGGTGGGCGCGGTGGACGTACCGGTCACGCTGAAGATCCGCACCGGCTGGTGCGCGCAGGTGCGCAACGCCCCGGCCATCGCCCGCATCGCCCAGGACAGCGGCATCGCCGCGCTGGCGGTGCACGGCCGCACCCGCGACCAGCACTACACCGGCACCGCCGAATACGACACCATCGCCGCGATCAAGGCCATGCTGGACATCCCGGTGCTGGCCAACGGCGACGTCGATTCGCCGCGCAAGGCCGCGCAGGTGCTGGCCCACACCGGTGCCGACGCGGTGATGGTCGGACGCGCCGCGCAGGGCCGGCCGTGGATCTTCCGCGAGATCGCCCACTACCTGGCCACCGGCCAGGAGTTGCCGCCGCCGTCGCTGCAGGAAGTGCGCGACATCCTGCTCGGCCACCTCGCCGACCTGCATGCCTTCTACGGCGAACCGCAGGGCGTGCGCATCGCCCGCAAGCACCTGGGCTGGTACGCGAAGGACCGGCCCGAGCACACCGATGAACAGCGCGCGGCCTTCCGCGCCGTGGTCAACGCCGCCGAGAGTGCCGACGCGCAGCTGCGGCTGACCCGCGACTACTTCGACGGGCTGATCGCCGCGCAGCCGCTGGCTGCCGCCTGA
PROTEIN sequence
Length: 359
MAEATPAHRAGAGIGAAPGTTMRRMQIGPYTIAPNVVLAPMAGVTDKPFRQLCKRLGAGLAASEMTISDPRFWNTRKSIHRMDHAGEPAPISVQIAGTEPRQLAEAARYNVDHGAQIIDINMGCPAKKVCNAWAGSALMRDEALVARILEAVVGAVDVPVTLKIRTGWCAQVRNAPAIARIAQDSGIAALAVHGRTRDQHYTGTAEYDTIAAIKAMLDIPVLANGDVDSPRKAAQVLAHTGADAVMVGRAAQGRPWIFREIAHYLATGQELPPPSLQEVRDILLGHLADLHAFYGEPQGVRIARKHLGWYAKDRPEHTDEQRAAFRAVVNAAESADAQLRLTRDYFDGLIAAQPLAAA*