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scnpilot_solids1_trim150_scaffold_29_20

Organism: SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: 17638..18366

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F5_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 242.0
  • Bit_score: 448
  • Evalue 3.30e-123
  • rbh
sigma 28 (flagella/sporulation); K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 242.0
  • Bit_score: 448
  • Evalue 1.00e-123
  • rbh
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 242.0
  • Bit_score: 448
  • Evalue 4.60e-123

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGTACACTTCGGCCGGCACTATCGATAAACAGCAGCAGATCGTGGAGTTTACTCCGCTTGTAAAACGGATCGCCAATCACATGATGGCGAGATTGCCTGTCAGTGTGGAAGCAGACGACCTGATACAGGTCGGAATGATAGGCCTGATGGAAGCGTTGAACCGGTATGAGGAGATGCCCGGCGCACAATTCGAGACATATGCGCAGCAGCGTATTCGCGGTGCCATGCTCGACGAACTGCGCCAGCTGGACTGGCTTCCACGAGGAGCCCGAAGGGCCATGCGCCAGATCGAGGGCGCTATTCATACGCTGCAGCAGCGCCTCGGCCGCTCTCCTTCGGAGCGGCAGATCGCCGAGGAACTCGGCGTGTCGATCGAAAATTACCAACAGATGCTGTTTGAAGCAAGAGGAACCCAGCTCATCCATTATGAGGATTTTTCGGACGATGAGGACGACGATTTTCTGGAGCGCAACTGTGCCGGCGATACTGCCGATCCGCTGGCGGCGCTGCTCGACGGCGATTTGCGCCAGGTTTTGATCAATGCGATAGAGACCCTGCCTGAACGCGAAAAAACGCTGATGGGGCTGTACTACGAGCAGGAACTGAATTTCAAGGAAATCGGCACAGTTTTGGGCGTCTCCGAATCGAGGATATGTCAAATTCATAGCCAGGCTGTTGCCCGGCTACGCGTGCGACTCAAGGAATGCGCATGGACTTCAATAGCATAA
PROTEIN sequence
Length: 243
MYTSAGTIDKQQQIVEFTPLVKRIANHMMARLPVSVEADDLIQVGMIGLMEALNRYEEMPGAQFETYAQQRIRGAMLDELRQLDWLPRGARRAMRQIEGAIHTLQQRLGRSPSERQIAEELGVSIENYQQMLFEARGTQLIHYEDFSDDEDDDFLERNCAGDTADPLAALLDGDLRQVLINAIETLPEREKTLMGLYYEQELNFKEIGTVLGVSESRICQIHSQAVARLRVRLKECAWTSIA*