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scnpilot_solids1_trim150_scaffold_4093_8

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: 7388..7561

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 subunit RpoN id=12553592 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 58.0
  • Bit_score: 94
  • Evalue 3.70e-17
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 57.0
  • Bit_score: 92
  • Evalue 4.50e-17
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 58.0
  • Bit_score: 94
  • Evalue 5.30e-17

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 174
GTGCGCGCGCTGCTGCGCCAGTTCATCGGCGCCGAGGACCCGGCCCGACCGCTGTCGGACAGCCAGCTCGCCGAGATGCTCAAGGAGCAAGGCATCGCCTGCGCGCGGCGCACCGTCGCCAAGTACCGCGAGCAGCTCAAGATCCCGACCGCGACCTTGCGCAAGGCGCTATAG
PROTEIN sequence
Length: 58
VRALLRQFIGAEDPARPLSDSQLAEMLKEQGIACARRTVAKYREQLKIPTATLRKAL*