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scnpilot_solids1_trim150_scaffold_71_66

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(65150..65953)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031C2F92 similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 260.0
  • Bit_score: 352
  • Evalue 4.60e-94
  • rbh
RNA polymerase sigma factor FliA {ECO:0000313|EMBL:KJL22517.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 264.0
  • Bit_score: 353
  • Evalue 2.20e-94
FliA/WhiG subfamily RNA polymerase sigma-28 subunit; K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 252.0
  • Bit_score: 237
  • Evalue 4.00e-60

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGTCGACGCTTGTCGAGCGCAACAGGCTGATCGTGGAGAACCTGCCGCTGGTCGGATATCTGGCGGCGGAGACGCATGCCCGCGCCACGCACATTCCGCGCGAGGATCTCGCGGCGGTCGGAGCGCTGGCGCTGGTGACCGCCGCCGACGCCTTCGATGCGAGCCTGGGAGTGCCGTTCGGCGCCTATGCCCGACGGCGCATCCTCGGCGCCTTCGCCGATGAGATGAGGTCGATGGACTGGGCCTCCCGCGGCATCCGCCGACGCATCAAGGAGACCATCGCGGTGAGCGACACCCTCGCGGCCGCCCTCGGACGCGCGCCGTCGGTCGCCGAGATCGCGACGGCCATGGCCACGTCCGAGCAGGAGGTCATCGAGGCGCTGGCGGATGCCGCACGCTCGGTGTCCTCGCTCGACGACGGCCACGAACTGGACCTGGTCGCGGACATGCCGCTGCCCGAGGAGTCCGCCGTGCTCGCCGAACGGCGAGCCGTGCTGGAGCACGCCGTCACCGCCCTCCCCGAGCGCATGCAGCTGATCATCCGGGCGGTCTACATCGAGGAGCGGCCCGTCAAGGACATCGCCGCGGAGCTGGGCGTCTCGCACTCCGCGGTCTCCCAGCAGCGCTCCGAAGCCGTGCGTCTGCTGCGCGACGCGATGGAGCGGTACTTCCACGAGAACGGCGAACCGCCGATCACCTCGCGGGTGTCCGCGACGGTCCGCGACGCCTTCTTCGACCGGATCGCCGCGACCGGCGGGGACCTCATGGCGCGCGCGTTCGGCAGGCACGCCTTCATCTCCTGA
PROTEIN sequence
Length: 268
MSTLVERNRLIVENLPLVGYLAAETHARATHIPREDLAAVGALALVTAADAFDASLGVPFGAYARRRILGAFADEMRSMDWASRGIRRRIKETIAVSDTLAAALGRAPSVAEIATAMATSEQEVIEALADAARSVSSLDDGHELDLVADMPLPEESAVLAERRAVLEHAVTALPERMQLIIRAVYIEERPVKDIAAELGVSHSAVSQQRSEAVRLLRDAMERYFHENGEPPITSRVSATVRDAFFDRIAATGGDLMARAFGRHAFIS*