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scnpilot_solids1_trim150_scaffold_35_105

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(101829..103739)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 621.0
  • Bit_score: 980
  • Evalue 8.80e-283
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EFDD21 similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 620.0
  • Bit_score: 981
  • Evalue 3.70e-283
  • rbh
ATP-dependent RNA helicase similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 594.0
  • Bit_score: 803
  • Evalue 4.30e-230
  • rbh

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1911
GTGACTGCTGACGATATCGCCTCCGGCGAGCCCGCGACCGATTCCGCTCCCGAGACCGCCGAGGACTCCGCGCAGGAGGCATCGAAGCCGGGCTTCGAGGAGCTCGGCATCACCGGCCCCGTGCTGAAGGCCATCAAGGACCTCGGCTACGAGACGCCCTCCCCCATTCAGGCGGCCACCATCCCGCTGCTGCTGGAGGGGCGCGACGTGCTGGGCACCGCGCAGACCGGTACCGGCAAGACCGCCGCGTTCGCGCTGCCGGTGCTGGAGCACCTGGACATGTCGCAGAAGACGCCGCAGGCGCTGGTGCTGGCTCCGACCCGCGAACTGGCGCTGCAGGTGTGCGAGGCGTTCGAGTCGTACTCCTCGCACATGAAGGACGTGCGCGTGCTGCCCGTCTACGGCGGGCAGGGCTACGGCGTACAGCTGTCGGCGCTGCGCCGCGGCGTGCACATCGTCGTCGGCACGCCCGGTCGCATCATGGACCACCAGGCCAAGGGCACCCTCGACCTCTCCGAGCTGAAGTACCTCGTGCTGGACGAGGCCGATGAGATGCTGAAGATGGGCTTCGCCGAGGATGTCGAGCAGATCCTCGCCGACACGCCGGAGAGCAAGCAGGTGGCGCTGTTCTCGGCCACGATGCCCTCCGCGATCCGCCGCCTCGCGCAGAAGTACCTCAACGCGCCCGAGGAGATCGCGATCAAGGGGAAGACCGCGACCAATCAGAACATCGCTCAGCGCTACCTGGTCGTCTCCTACGCGCAGAAGGTGGATGCGCTGACGCGCATCCTCGAGGTGGAGAACTTCGACGGCATGATCGTGTTCGTCCGCACGAAGAACGAGACCGAGACGGTCGCCGAGAAGCTCCGCGCCCGCGGCTACTCCGCCGCCGCCATCAACGGCGACGTGCCGCAGGTGCAGCGCGAGCGCTCGGTCGGGCACCTGCGCGACGGCAGGCTCGACATCCTGGTCGCCACCGATGTGGCAGCCCGTGGCCTGGACGTGGAGCGCATCAGCCACGTCATCAACTTCGACATCCCCACCGACACCGAGTCGTACGTGCACCGCATCGGGCGCACCGGCCGTGCCGGACGCAAGGGCGATGCGATCAGCTTCATCACGCCGCGCGAGCGCTACCTGCTGAAGCACATCGAGAAGGCGACCCGTCAGCAGCCGACCCAGATGCAGCTGCCGACCACCGAGGACGTGAACACCACGCGCCTGACCCGGTTCGACGACGCCATCACCCAGGCTCTGGAGGAGACCGGTCGCATCGAGGCGTTCCGCGACATCATCGCGCACTACGTGAACCACCACGACGTGCCGGAGGCCGATGTCGCCGCAGCCCTCGCCGTGGTCGCGCAGGGCGAGACCCCGTTGCTGCTGGACCCCGAGCACGACGAGCTGTCCCGCGCCGTGCAGCGCGACAACCGTCCTCCGCGCGAGCGCAGCGACCGTCCCGACCGCGGACCGCGCGAGCGCCGCAGCCGCGGCGACTACACCGCATACCGCATCGAGGTCGGCCGTCGTCACCGCGTGGAACCGCGCCAGATCGTCGGCGCGCTGGCGAACGAGGGCGGCCTGGGCCGCGACGACTTCGGCGCCATCGCCATCAAGCCGGAGTTCTCGATCGTGGAGCTGCCCGTGAACATGGATCCGGCGGTGCTGGACAAGCTGCGCGACACCCGCATCTCCGGTCGTCTCATCGAGATCAAGCCCGACCGCGGCGTGCCGAACCGTCGTGCGCCGCGCGACGACCGTGGCCGCGGCCACGACCGGGGCCACTCCCGGGATGACCGGGGCCACTCCCGCGACGACCGGGCCCACTCCCGAGACGACCGGGGTCACCGAGACGACCGGGGCTACTCCCGCGACGACCGCCCCGCCCGCAACCCCCGCCACAAGAACTGA
PROTEIN sequence
Length: 637
VTADDIASGEPATDSAPETAEDSAQEASKPGFEELGITGPVLKAIKDLGYETPSPIQAATIPLLLEGRDVLGTAQTGTGKTAAFALPVLEHLDMSQKTPQALVLAPTRELALQVCEAFESYSSHMKDVRVLPVYGGQGYGVQLSALRRGVHIVVGTPGRIMDHQAKGTLDLSELKYLVLDEADEMLKMGFAEDVEQILADTPESKQVALFSATMPSAIRRLAQKYLNAPEEIAIKGKTATNQNIAQRYLVVSYAQKVDALTRILEVENFDGMIVFVRTKNETETVAEKLRARGYSAAAINGDVPQVQRERSVGHLRDGRLDILVATDVAARGLDVERISHVINFDIPTDTESYVHRIGRTGRAGRKGDAISFITPRERYLLKHIEKATRQQPTQMQLPTTEDVNTTRLTRFDDAITQALEETGRIEAFRDIIAHYVNHHDVPEADVAAALAVVAQGETPLLLDPEHDELSRAVQRDNRPPRERSDRPDRGPRERRSRGDYTAYRIEVGRRHRVEPRQIVGALANEGGLGRDDFGAIAIKPEFSIVELPVNMDPAVLDKLRDTRISGRLIEIKPDRGVPNRRAPRDDRGRGHDRGHSRDDRGHSRDDRAHSRDDRGHRDDRGYSRDDRPARNPRHKN*