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scnpilot_solids1_trim150_scaffold_39_74

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 72689..73351

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Microbacterium barkeri RepID=UPI0002FB61FB similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 220.0
  • Bit_score: 374
  • Evalue 5.50e-101
  • rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 220.0
  • Bit_score: 373
  • Evalue 2.20e-100
rplD; ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 220.0
  • Bit_score: 352
  • Evalue 7.00e-95
  • rbh

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGGCTGACTCGACTCTCGCGCTCGACGTCCTCGCGGTCGACGGCAAGAAGGCAGGCTCCATCGAGCTGCCCGCCGCGATCTTCGACGTCAAGACCAACATCCCGCTGATCCACCAGGTCGTCATCGCGCAGCTCGCTGCCGCACGACAGGGCACCCACTCGACCAAGCGTCGTGGTGAGGTCTCCGGTGCCGGCCGCAAGCCCTTCAAGCAGAAGGGCACGGGTAACGCCCGTCAGGGCTCCATCCGCGCGCCGCACATGACCGGCGGTGGCATCGTCCACGGCCCGAAGCCGCGCGACTACTCGCAGCGCACCCCCAAGAAGATGATCGCCGCCGCCCTGCTGGGTGTACTGAGCGACCGCTTCCGCGGTGAGCGCCTGCACGCAGTCGAGGCGTTCGTCGCCGACAGCACCCCTTCGACCAAGACCGCTGCGAGCCTGCTCGCCGCCGTCGCCGGTCCGAAGAACGTGCTCGTCGTCATCGAGCGCAGCGATGAGCTGACCTTCAAGAGCGTTCGGAACCTGCCGAACGTGCACGTGCTCAGCTTCGACCAGCTGAACGCCTACGACGTGGTCGTCTCCGACGACATCGTCTTCACCAAGGCCGCCCTCGAGGGCTTCATCGCCTCGAAGACCGGCGCAACCGAGGAGGTCTCGGCATGA
PROTEIN sequence
Length: 221
MADSTLALDVLAVDGKKAGSIELPAAIFDVKTNIPLIHQVVIAQLAAARQGTHSTKRRGEVSGAGRKPFKQKGTGNARQGSIRAPHMTGGGIVHGPKPRDYSQRTPKKMIAAALLGVLSDRFRGERLHAVEAFVADSTPSTKTAASLLAAVAGPKNVLVVIERSDELTFKSVRNLPNVHVLSFDQLNAYDVVVSDDIVFTKAALEGFIASKTGATEEVSA*