ggKbase home page

scnpilot_solids1_trim150_scaffold_467_21

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(30038..30697)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator n=1 Tax=Patulibacter medicamentivorans RepID=H0EB03_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 189.0
  • Bit_score: 144
  • Evalue 9.20e-32
DNA-binding response regulator {ECO:0000313|EMBL:EHN09142.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 189.0
  • Bit_score: 144
  • Evalue 1.30e-31
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 195.0
  • Bit_score: 133
  • Evalue 6.60e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCCCCCGAGCGCCCCGCCCCTTCCGCTCGACCTCGGCACCGCCGAGGCGCTGCCCGACTCCTCGGTCCGCGCGCTCGTCGTCGACTCCCACGCGCCCTCGCGGATCGGCCTCGCGGCGCTGCTCGAGGCGCAGGCCTGGATCGAACGGTGCCTGCTCGCCGCCGACAGCCGGGAATCGGTCGCGCTCGCCCGCCGCCACCGGCCCGACGTGGCGCTCCTCGACATCTCCCAGACAGGCCCCTTCGCGAGCTCGATCACGGCCGCGATCCGCGCTGCCCACCCGGGCGTCCAGATCCTCCTCACCTCCCGCTGCCGCACCTCGCCCGGCGCGCCGCCCGCCGCCCTCGGCGCGGTCAGCTTCCTGCCCGCCGGCGTCTCGCCCGGGGACGTGGTCGACTCCGTCCGCGCCGCGGTGATCGGCGGCGAGCCACTCGACCCCGCCGGCGTCGCGCCGCCCGCCGTCGGCCCCGGGCTCAGCGACCGCGAGCGCGAGATCCTCCTGCTCCTCGGCACCGGCGCGACCAACCGCGAGATCGCCGCGCGCCTCCACCTCGGTCCCGACACGGTGAAGAAGAGCGCCACCGCGCTCTACCGCAAGCTCGGCGTCCGCAACCGCACCGAGGCCGCGCAGCGCGCCGCGACGTTCCTCGCCGCCTGA
PROTEIN sequence
Length: 220
MPPSAPPLPLDLGTAEALPDSSVRALVVDSHAPSRIGLAALLEAQAWIERCLLAADSRESVALARRHRPDVALLDISQTGPFASSITAAIRAAHPGVQILLTSRCRTSPGAPPAALGAVSFLPAGVSPGDVVDSVRAAVIGGEPLDPAGVAPPAVGPGLSDREREILLLLGTGATNREIAARLHLGPDTVKKSATALYRKLGVRNRTEAAQRAATFLAA*