ggKbase home page

scnpilot_solids1_trim150_scaffold_609_3

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 2754..3071

Top 3 Functional Annotations

Value Algorithm Source
Subunit S of type I restriction-modification system n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YQ30_LYNSP similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 65.0
  • Bit_score: 67
  • Evalue 9.00e-09
Uncharacterized protein {ECO:0000313|EMBL:KKL04559.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 65.0
  • Bit_score: 68
  • Evalue 5.60e-09
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 88.0
  • Bit_score: 64
  • Evalue 2.40e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 318
ATGGCCGGTGAGCGGTCCACGGCCGTCGCCGAACGGTTCGGTGCGAACCTGCGCCGCGTGCGCCGCCGCGAAGGCCTCTCGCAGGAAGGGCTGGCGGTCCGCGCCTCCCTGCACCGCACCGAGATCGGCCGTCTGGAGGGCGGCGAGCACGCCTGTCGGATCGACACCCTGATCCGACTCGCCGGAGCGATGGCGATTCCGCCCGGCGAACTGCTCGACGGGATCGCCTGGGTCCCGGCGCCTGAGCCCGAGGGCGCATTCGCATTCGGATCCAGCTCGATCTCCCGAAGGCTGATCAAAGACTGGCCAAGCCGATGA
PROTEIN sequence
Length: 106
MAGERSTAVAERFGANLRRVRRREGLSQEGLAVRASLHRTEIGRLEGGEHACRIDTLIRLAGAMAIPPGELLDGIAWVPAPEPEGAFAFGSSSISRRLIKDWPSR*