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scnpilot_solids1_trim150_scaffold_2477_7

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(5043..6107)

Top 3 Functional Annotations

Value Algorithm Source
quaternary ammonium transporter n=1 Tax=Patulibacter americanus RepID=UPI0003B3A570 similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 356.0
  • Bit_score: 346
  • Evalue 2.60e-92
  • rbh
Substrate-binding region of ABC-type glycinee betaine transport system {ECO:0000313|EMBL:EHN12006.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 354.0
  • Bit_score: 336
  • Evalue 6.30e-89
substrate-binding region of ABC-type glycine betaine transporter; K05845 osmoprotectant transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 348.0
  • Bit_score: 192
  • Evalue 2.50e-46

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
GTGAGGTTCAACCATTACAAGCCGCTGATGGCCCTGGCGATGCTGATCGCGGCGCTCGCCCTCGCGGTCGGCATCTCGGCCTGCGGCGGCGGCGGCTCGACCACCACGGCGGAATCGACCGAAGCGGAATCCCCAGCGACGGAAGAAACCAACACCGAAGAACCGGCCGAAGAAGGCGAAGAAGGCGAAGAAGCCGGCGGTGAAGCGGAAGCGATCACCGCCAATCCGGAAAACGCCAAAGTCAGCCTGACGATCGGCTCGAAGAACTTCCCCGAACAGGAAATCCTCGGCGAAATCTATACGCAGGCCCTGCAGGCGGCCGGGTACAAGGCGAAGAGCGATCTCAGCCTCGGCTCCGAAACGGTGGCGCTGAAAACGCTGAAGGCGGGCCAGATCTCCGGCTACCCGGAGTACGCCTCGACGGCCCTCACCTCGTTCTTCAAGTTCGAACCGGAAGAAGTGCCGGCCGACGCGACCGAAGCGTGGGAAAAGGCCAACGCCGAATTCGAAAAGGAAGGCCTGGTGGCGTTCGAACCCACCCCGTTCGCCAGCGCCAACGCGGTCGGCCTGTTGAAGACGACGGCGGAAAAGTACAACCTGAAAACGGTCTCCGACCTCAAGGGCGTGAGTGAAAAGCTCACCCTCTACGGGTCGCCCGAGTGCCGCCAGCGGATCGACTGCCTGGCCGGGCTCGAAAAACTGTACGGGCTGAAGTTCAAGGAATTCAAACCCGTCGACATCAGCCTCCGCTACACGGTGCTGGAAAAGGGTCAGGCGGATCTCTCGATCCTCTTCACCACCGATCCGCAGCTTGCCGCGGAGAGTGAAAAGTTCGTCATCCTGGAAGACGACAAGAAGGTCTTCCCGGCCGGCAACGTGATCTTCGTGACCTCGAAGAAAGTCGCCGAATCGGCCGGCCCGGATTACGAAAAGACCATCCTCAACGTCCAGCAGGGCCTCACCCTGGAAGTGATGCAGGAGCTGGACGCGCGGGTCGAACTCGAAAAACAGACCCCGAAGGAAGCCGCCGCGGCCTACCTGGAAGCGGCCGGCTACGTCGAATAG
PROTEIN sequence
Length: 355
VRFNHYKPLMALAMLIAALALAVGISACGGGGSTTTAESTEAESPATEETNTEEPAEEGEEGEEAGGEAEAITANPENAKVSLTIGSKNFPEQEILGEIYTQALQAAGYKAKSDLSLGSETVALKTLKAGQISGYPEYASTALTSFFKFEPEEVPADATEAWEKANAEFEKEGLVAFEPTPFASANAVGLLKTTAEKYNLKTVSDLKGVSEKLTLYGSPECRQRIDCLAGLEKLYGLKFKEFKPVDISLRYTVLEKGQADLSILFTTDPQLAAESEKFVILEDDKKVFPAGNVIFVTSKKVAESAGPDYEKTILNVQQGLTLEVMQELDARVELEKQTPKEAAAAYLEAAGYVE*