ggKbase home page

scnpilot_solids1_trim150_scaffold_1792_5

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_40_703

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 5337..8765

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ70_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 999.99
  • Bit_score: 1040
  • Evalue 0.0
TonB-dependent receptor plug {ECO:0000313|EMBL:AHM63014.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 999.99
  • Bit_score: 1042
  • Evalue 0.0
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 999.99
  • Bit_score: 1040
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flammeovirgaceae bacterium 311 → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3429
ATGATTTTAAAACCAGGCAACCAAAACGATAACGTTGCCACATCCTTAAAAGCCAAAACATGGATGATTATGAAATTAACAATTGCCTTATTGTTATTTTTTACCTTCCAGGTTAGCGCTAAAACCCTTGCGCAGAGAATCACTATAGTTAAAAATAACATTCATCTTTCAGAGGTATTTAAAGATATTGAACAACAAACAGAATATCATTTTTTCTATGATAAGGACCTGATAAAAAACACGTACCCAATTGACATTGGTATTAAAAATGCAACTTTAGATCAGGCGTTATCAGTGTGCTTAAAAGGGCAGAATCTGACTTATTCGGTTGTGAAAAATACAGTGGTGATAAGGCCGGAAATAAAAACAACTTACACTCAGGTTCAGCCTACTTTCCCACGGAAGAATCCTACCGTACAACCGTCTATTGAGATTCATGGACGGGTAGTGAACGAGCAGGGAGATCCTCTGCAGGATGCAAGTGTAACGATTAAAGGCACAAATAAAGGTGTTGTCACAAATAGCAATGGAGATTTTACGATTGATGTTCCAGACACCAAGACAGTGATTATATTCAGTTTTACCGGTTATAAATCGCAAGAAATCAGGGTTGACAACAAATCCACAATAAATGTAATACTGGTAAGAGAGGACAATGCTTTAAATGAAGTTGTTGTTACGGCGTTAGGAATCAAACAGGAGAAAAAGACTCTTACTTATGCTACCCAAAGTGTAAACCCCGAACAGATGACAAAAGCGCGGGAGCTGAATGTAATAAATTCATTAGAGGGGAAAGTCGCCGGTTTAAACATTAGTCAGACCGGAAGTGGAGTTGGCGCACCTTCAAGGGTGACATTGCGTGGAAACCGTTCTATCAATGGGGACAGCCAGCCTTTATATATTATTGATGGTGTACCTGTGCTTGGAGTACCAGAGTTTTTGAACTCTGATGAAATAGCTTCCATTGAAGTATTAAAGGGGTCAAATGCTGCTGCCCTGTATGGAAGTGATGCACAAAACGGAGCAATTATTATTACCACTAAGAAAGGGCGAGAAGGTGTAACAAAGGTGTCACTCAACAACACATTTATGGCGAGCCAGGCCGATCTTAGTATCCCGTTTCAGAACGTTTATGGTCAGGGAATCAACGGAACATATCAGAAAGGTTCAGGTTATTCATGGGGTCCGAAGATGGAAGGACAAACTGTTAGTAACTGGACACTCGATCCTTCCAGGGCAGGTGAGACGTATTCAATGACTCCGCAACCTGATAATGTAAAAGATATATTTCAAACCGGCTATACCATATCGAACAATTTACAGGCAAGTCTTGGGGGAAAAAATACACAGGCGTTTTTTTCTCTCACTTCTACCGAAGGGAGAGGAGTTTTATCCAGTAATAAATTACAACGAAATAATTTAATGGCTCGGGTAACCAGTAGTCTTTCAAAGAAATTTTCACTTGATGTCAAACTAAGTTACACAAGGCAGAAAATTGATAATCCTTTGAGACAGAGTACGGATAATTTTAACCCAATGCAGCAGATATATGATATACCAAGAAATATCAGAACGCAGGATGCAAAAAAATTTGAATTTCCCGATGCAAATGGGGTTATGCAGCAGGATTTCTGGGCACCCGGATTTTCATCAACAGCCGAAAATCCTTATTGGGTTTTAAATCGTAATCTTTTTGAAGAGGAAGTTGGTAGAATAACTGGCATGGCTTCGCTAACTTATCACATTCTGGACAATTTAGACCTGATGGTTCGCAGCTCATATGACAGAGTTGATGAAACTGATGAGCAAAAGGATTATAACGGAACGTTAGTTAGAGCTTTACATGGACGATACTATGTAACCAAAAGAAATAATTATGAATTTAATAGTGATTTTCTTTTATCCTACAATAAAGACCTTTCCGAAAATTGGAATTTAGATTTACATGCGGGAGGTAATGTCAAGAATCGCCTGTTGAATGAATCCTTAAGTTCCAATACGGGAGATGCACTTTCGATACCAAACTTCTTCTCATTATCTAATACCACGCTGCCTGTAACCAGCTATAATCCAGGAGCTCCGATTAATATACAATCCCTGTATGCATTTGGTAAAATTAGTTGGAAAGATGCCATCTTTTTGGATTTGACGGGTCGTAATGATTGGAGTTCTACGTTACCTGCGAGCAGCCGTTCATATTTTTATCCGTCGGCAGGATTATCCGTGATTCTTTCAGATTTGATTCCTTCTTTTCCTAAAGTATTTGATTTTGCAAAAATCAGGGCTTCATATGCAAAGGTCGGAAGCAGTGCGCCCCCGTTTATGTTACAACGTACGGCAACATTTTCTGCCGGAGGATCAAACGGCTTTATTGCTTTAGGTAATACTTTGCCCAACAAAAATCTTAAGCCTGAAGAGACGAAGTCTTTTGAAAGTGGGGTTGATGTACGTTTCCTTAAAGGAAGGTTGGGATTAAATTTTACATACTTTAAGACCAATACAGTAAATCAATTGTTCACGATTGCATTACCAGTCGGATCTGGCGCAGCTTCTTTCTATACCAATGGAGGGAATATTCAAAATAAAGGAGTGGAGGTTGTTTTAAACACCGTGCCTGTACAAACAAAGAATTTCAGATGGACGCTTGATGTCAATTTTTCTCATTTGAAGAATACTGTTGTGAGTATATCTGACGAACGGCCAAAAGTTGTTATTGCATCAAACTTTGCTTCCGATTACGTAATACAGCAGGGACTTCCTTTTGGAGATATTTTTACCATTGGGTTTAAGCGGGATAGTATCGGTAGAGTAATAGTAGGAAGTAATGGTGTCCCACAAGTAGTAAATAGTAAAAATCATGACATTGGCCATTACACTCCTGATTGGACGTCAGGCATCTCAAGTTCTTTTTCATATAAAAGGTTTAATTTATCATTTGTTATTGATCACAGGCAGGGCGGCATCGTTGAATCTTTTACAAGAGCCTCTCTTGATTTTCTCGGAGTATCCAAAGAAACACTTCAGGGAAGAGAAGGCGGGCTAATTTTTGGACAGAATATTTTTAAGAATTATACAGCGGTTACGGAGGATGGCAAGGTAAATACCATCCCGGTTGATGCCCAAACCCTTTGGAGTACCATTGGGAATATAAGTTTGCCCGTCGGTGAAGTATATGCTTTGGATGCAACCAATACGCGTCTGCGGGAACTAATTATTGGTTATACTCTGCCAGAATCTTTCACGAGGAAGTTACATCTATCCGGCGTAGATGTTTCTCTGGTAGGCAGAAATCTATTTTTTATTTCCAGAGCCACTCCGGGCCTTGATCCGGACATTCTAACCGGAACAGGCACTTCTTCTGAAGGCTATTCAACTTATCCACCACCTTCCACCCGGTCTTATGGCATTAACGTGAAAATTAATTTTTAA
PROTEIN sequence
Length: 1143
MILKPGNQNDNVATSLKAKTWMIMKLTIALLLFFTFQVSAKTLAQRITIVKNNIHLSEVFKDIEQQTEYHFFYDKDLIKNTYPIDIGIKNATLDQALSVCLKGQNLTYSVVKNTVVIRPEIKTTYTQVQPTFPRKNPTVQPSIEIHGRVVNEQGDPLQDASVTIKGTNKGVVTNSNGDFTIDVPDTKTVIIFSFTGYKSQEIRVDNKSTINVILVREDNALNEVVVTALGIKQEKKTLTYATQSVNPEQMTKARELNVINSLEGKVAGLNISQTGSGVGAPSRVTLRGNRSINGDSQPLYIIDGVPVLGVPEFLNSDEIASIEVLKGSNAAALYGSDAQNGAIIITTKKGREGVTKVSLNNTFMASQADLSIPFQNVYGQGINGTYQKGSGYSWGPKMEGQTVSNWTLDPSRAGETYSMTPQPDNVKDIFQTGYTISNNLQASLGGKNTQAFFSLTSTEGRGVLSSNKLQRNNLMARVTSSLSKKFSLDVKLSYTRQKIDNPLRQSTDNFNPMQQIYDIPRNIRTQDAKKFEFPDANGVMQQDFWAPGFSSTAENPYWVLNRNLFEEEVGRITGMASLTYHILDNLDLMVRSSYDRVDETDEQKDYNGTLVRALHGRYYVTKRNNYEFNSDFLLSYNKDLSENWNLDLHAGGNVKNRLLNESLSSNTGDALSIPNFFSLSNTTLPVTSYNPGAPINIQSLYAFGKISWKDAIFLDLTGRNDWSSTLPASSRSYFYPSAGLSVILSDLIPSFPKVFDFAKIRASYAKVGSSAPPFMLQRTATFSAGGSNGFIALGNTLPNKNLKPEETKSFESGVDVRFLKGRLGLNFTYFKTNTVNQLFTIALPVGSGAASFYTNGGNIQNKGVEVVLNTVPVQTKNFRWTLDVNFSHLKNTVVSISDERPKVVIASNFASDYVIQQGLPFGDIFTIGFKRDSIGRVIVGSNGVPQVVNSKNHDIGHYTPDWTSGISSSFSYKRFNLSFVIDHRQGGIVESFTRASLDFLGVSKETLQGREGGLIFGQNIFKNYTAVTEDGKVNTIPVDAQTLWSTIGNISLPVGEVYALDATNTRLRELIIGYTLPESFTRKLHLSGVDVSLVGRNLFFISRATPGLDPDILTGTGTSSEGYSTYPPPSTRSYGINVKINF*