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scnpilot_solids2_trim150_scaffold_258

Search features with annotation key words

Displaying items 31-60 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_258_31
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30496..30696
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL19576.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_solids2_trim150_scaffold_258_32
unknown

Not on your lists

30867..31091
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_258_33
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31084..33246
-----------------
DNA (2163bp)
protein (721aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B352F2
AAA-like domain protein {ECO:0000313|EMBL:KJL19575.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_258_34
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33425..34246
-----------------
DNA (822bp)
protein (274aa)
Uncharacterized protein n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z8H5_STRSW
Uncharacterized protein {ECO:0000313|EMBL:KJL19574.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_258_35
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34264..34617
-----------------
DNA (354bp)
protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:EXJ50804.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_solids2_trim150_scaffold_258_36
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34614..35444
-----------------
DNA (831bp)
protein (277aa)
Uncharacterized protein {ECO:0000313|EMBL:EXJ50805.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_solids2_trim150_scaffold_258_37
Gordonia sputi, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35665..38073
-----------------
DNA (2409bp)
protein (803aa)
Putative recombinase n=1 Tax=Gordonia sputi NBRC 100414 RepID=H5U6L1_9ACTO rbh
Putative recombinase {ECO:0000313|EMBL:GAB41369.1}; TaxID=1089453 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sputi NBRC 100414.;"
resolvase domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_258_trna_2
unknown

Not on your lists

comp(37568..37639)
-----------------
DNA (72bp)
transferRNA Gln
scnpilot_solids2_trim150_scaffold_258_38
unknown

Not on your lists

38305..38889
-----------------
DNA (585bp)
protein (195aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_258_39
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39038..40546)
-----------------
DNA (1509bp)
protein (503aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
gltX; glutamyl- and glutaminyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] rbh
glutamyl-tRNA synthetase n=1 Tax=Microbacterium barkeri RepID=UPI0003085AEB rbh
scnpilot_solids2_trim150_scaffold_258_40
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40591..41865)
-----------------
DNA (1275bp)
protein (425aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C243C rbh
MFS transporter {ECO:0000313|EMBL:KDA05762.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
permease of the major facilitator superfamily rbh
scnpilot_solids2_trim150_scaffold_258_41
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41862..42638)
-----------------
DNA (777bp)
protein (259aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Microbacterium barkeri RepID=UPI00030AE647 rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KDA05763.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase rbh
scnpilot_solids2_trim150_scaffold_258_42
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42780..43724)
-----------------
DNA (945bp)
protein (315aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003482D12
Uncharacterized protein {ECO:0000313|EMBL:KJL30975.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_258_43
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43972..45060)
-----------------
DNA (1089bp)
protein (363aa)
Branched-chain-amino-acid aminotransferase {ECO:0000313|EMBL:KJL18529.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KJL18529.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ilvE; branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] rbh
branched-chain amino acid aminotransferase n=1 Tax=Microbacterium barkeri RepID=UPI00030657FA rbh
scnpilot_solids2_trim150_scaffold_258_44
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45108..46157)
-----------------
DNA (1050bp)
protein (350aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:KDA05765.1}; EC=1.1.1.85 {ECO:0000313|EMBL:KDA05765.1};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
leuB; isocitrate/isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] rbh
3-isopropylmalate dehydrogenase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E497_9MICO rbh
scnpilot_solids2_trim150_scaffold_258_45
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(46332..47951)
-----------------
DNA (1620bp)
protein (540aa)
serA; phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] rbh
3-phosphoglycerate dehydrogenase n=1 Tax=Microbacterium barkeri RepID=UPI0002D6BEEB rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_258_46
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48070..48408)
-----------------
DNA (339bp)
protein (113aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031FA8F6
Uncharacterized protein {ECO:0000313|EMBL:KJL28137.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
bacitracin resistance protein
scnpilot_solids2_trim150_scaffold_258_47
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48405..48878)
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000308E210
Uncharacterized protein {ECO:0000313|EMBL:KDA05769.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
DNA polymerase III, gamma/tau subunits
scnpilot_solids2_trim150_scaffold_258_48
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48950..49879
-----------------
DNA (930bp)
protein (310aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFM4_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL28139.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_258_49
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50058..51083
-----------------
DNA (1026bp)
protein (342aa)
iron ABC transporter substrate-binding protein n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI00037E5531 rbh
Fe(3+)-binding periplasmic protein {ECO:0000313|EMBL:KJL19542.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_258_50
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51158..52666
-----------------
DNA (1509bp)
protein (503aa)
iron ABC transporter permease n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI00037D6636 rbh
Molybdate ABC transporter permease protein {ECO:0000313|EMBL:KJL19541.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_258_51
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52666..53790
-----------------
DNA (1125bp)
protein (375aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
sufC; iron(III)-transport ATP-binding protein (EC:3.6.3.30); K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] rbh
sugar ABC transporter n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI0003754E1E rbh
scnpilot_solids2_trim150_scaffold_258_52
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53872..54900)
-----------------
DNA (1029bp)
protein (343aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ilvC; ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86] rbh
ketol-acid reductoisomerase n=1 Tax=Microbacterium barkeri RepID=UPI00030583E2 rbh
scnpilot_solids2_trim150_scaffold_258_53
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54942..55451)
-----------------
DNA (510bp)
protein (170aa)
Putative acetolactate synthase small subunit {ECO:0000313|EMBL:KJL19538.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KJL19538.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ilvH; acetolactate synthase, small (regulatory) subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
acetolactate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003804D84
scnpilot_solids2_trim150_scaffold_258_54
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55455..57260)
-----------------
DNA (1806bp)
protein (602aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
ilvB; thiamine pyrophosphate-requiring enzyme; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
acetolactate synthase n=1 Tax=Microbacterium barkeri RepID=UPI0002E58C22 rbh
scnpilot_solids2_trim150_scaffold_258_55
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57321..59054)
-----------------
DNA (1734bp)
protein (578aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ilvD; dihydroxyacid dehydratase/phosphogluconate dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] rbh
dihydroxy-acid dehydratase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003481907 rbh
scnpilot_solids2_trim150_scaffold_258_56
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59064..59861)
-----------------
DNA (798bp)
protein (266aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
trehalose-6-phosphatase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D723DA rbh
scnpilot_solids2_trim150_scaffold_258_57
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59858..61285)
-----------------
DNA (1428bp)
protein (476aa)
Trehalose-phosphate synthase {ECO:0000313|EMBL:KJL18507.1}; EC=2.4.1.- {ECO:0000313|EMBL:KJL18507.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
trehalose-6-phosphate synthase; K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KHP8_9MICO rbh
scnpilot_solids2_trim150_scaffold_258_58
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(61332..62552)
-----------------
DNA (1221bp)
protein (407aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCR3_9MICO rbh
Major Facilitator Superfamily transporter rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_258_59
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

62687..62965
-----------------
DNA (279bp)
protein (93aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDL0_9MICO
NADH:ubiquinone oxidoreductase {ECO:0000313|EMBL:KDA05775.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
Displaying items 31-60 of 84 in total

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