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scnpilot_solids2_trim150_scaffold_258

Search features with annotation key words

Displaying items 61-84 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_258_60
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(63056..64234)
-----------------
DNA (1179bp)
protein (393aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KDA05776.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KDA05776.1};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
acetyl-CoA acetyltransferase n=1 Tax=Pseudoclavibacter faecalis RepID=UPI00037445D9 rbh
scnpilot_solids2_trim150_scaffold_258_61
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64231..64884)
-----------------
DNA (654bp)
protein (218aa)
acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] rbh
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Microbacterium yannicii RepID=UPI0002F8BB0C rbh
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:KDA05777.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids2_trim150_scaffold_258_62
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(64887..65657)
-----------------
DNA (771bp)
protein (257aa)
acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] rbh
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C09B9 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_258_63
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

65762..66556
-----------------
DNA (795bp)
protein (265aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K333_9MICO rbh
HTH-type transcriptional regulator KipR {ECO:0000313|EMBL:KJL30761.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_258_64
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66579..67469)
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F6ADE rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KDA05779.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
alpha/beta hydrolase fold protein
scnpilot_solids2_trim150_scaffold_258_65
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67466..68218)
-----------------
DNA (753bp)
protein (251aa)
bdhA; 3-hydroxybutyrate dehydrogenase (EC:1.1.1.30); K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] rbh
3-hydroxybutyrate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036C4645 rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:KDA05780.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids2_trim150_scaffold_258_66
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(68215..68883)
-----------------
DNA (669bp)
protein (223aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377CB29 rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KDA05781.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_258_67
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(68864..70444)
-----------------
DNA (1581bp)
protein (527aa)
AMP-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003821B8C rbh
Acid--CoA ligase {ECO:0000313|EMBL:KDA05782.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids2_trim150_scaffold_258_68
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70444..71550)
-----------------
DNA (1107bp)
protein (369aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E471_9MICO rbh
ABC transporter permease {ECO:0000313|EMBL:KDA05783.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
scnpilot_solids2_trim150_scaffold_258_69
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71547..72422)
-----------------
DNA (876bp)
protein (292aa)
ABC transporter permease n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379E7E7 rbh
ABC transporter permease {ECO:0000313|EMBL:KDA05784.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
scnpilot_solids2_trim150_scaffold_258_70
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(72419..73129)
-----------------
DNA (711bp)
protein (237aa)
branched-chain amino acid ABC transporter ATPase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037414F8 rbh
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:KDA05785.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ABC transporter related protein; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_258_71
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(73126..73902)
-----------------
DNA (777bp)
protein (259aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E468_9MICO rbh
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDA05786.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
livG; branched-chain amino acid transport ATP-binding protein LivG
scnpilot_solids2_trim150_scaffold_258_72
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(73910..75103)
-----------------
DNA (1194bp)
protein (398aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000371DA05 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL35400.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ABC branched-chain amino acid transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_258_73
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75243..75683
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDK5_9MICO
Transcriptional activatory protein BadR {ECO:0000313|EMBL:KJL28154.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_258_74
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75680..76906
-----------------
DNA (1227bp)
protein (409aa)
MFS transporter n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFJ4_9MICO rbh
Multidrug efflux protein YfmO {ECO:0000313|EMBL:KJL28155.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
permease of the major facilitator superfamily rbh
scnpilot_solids2_trim150_scaffold_258_75
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

76933..77415
-----------------
DNA (483bp)
protein (161aa)
Proline--tRNA ligase {ECO:0000313|EMBL:KJL35900.1}; EC=6.1.1.15 {ECO:0000313|EMBL:KJL35900.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KHN6_9MICO
prolyl-tRNA synthetase
scnpilot_solids2_trim150_scaffold_258_76
unknown

Not on your lists

comp(77419..77907)
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B72F0D
scnpilot_solids2_trim150_scaffold_258_77
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

77979..79070
-----------------
DNA (1092bp)
protein (364aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XVC8_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EON23284.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_258_trna_1
unknown

Not on your lists

comp(79142..79214)
-----------------
DNA (73bp)
transferRNA Lys
scnpilot_solids2_trim150_scaffold_258_78
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79390..80199
-----------------
DNA (810bp)
protein (270aa)
Histidinol-phosphatase {ECO:0000313|EMBL:KJL17904.1}; EC=3.1.3.15 {ECO:0000313|EMBL:KJL17904.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
archaeal fructose-1,6-bisphosphatase; K05602 histidinol-phosphatase [EC:3.1.3.15] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EBC8D7 rbh
scnpilot_solids2_trim150_scaffold_258_79
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80231..80803
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034500AD
Uncharacterized protein {ECO:0000313|EMBL:KJL17905.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
scnpilot_solids2_trim150_scaffold_258_80
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80852..81091)
-----------------
DNA (240bp)
protein (80aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003186763
Uncharacterized protein {ECO:0000313|EMBL:KJL28838.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids2_trim150_scaffold_258_81
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

81173..81790
-----------------
DNA (618bp)
protein (206aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372882B
HTH-type transcriptional repressor KstR2 {ECO:0000313|EMBL:KJL27044.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_258_82
unknown

Not on your lists

81855..82040
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

Displaying items 61-84 of 84 in total

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