ggKbase home page

scnpilot_solids2_trim150_scaffold_460_29

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(29002..32127)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003655A8C similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 999.99
  • Bit_score: 1676
  • Evalue 0.0
  • rbh
Multidrug transporter AcrB {ECO:0000313|EMBL:KEQ30723.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 999.99
  • Bit_score: 1265
  • Evalue 0.0
hydrophobe/amphiphile efflux-1 (HAE1) family transporter similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 999.99
  • Bit_score: 1187
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3126
ATGCTGAATAAGATCATTAAAAGACCCGTACTCGCTACGGTCATTTCCATTATACTGGTGCTATTGGGGATCGTGGGCTTGCTGCGCATCCCGATGACACAATTTCCCGAGATCGCACCACCTACCGTATTCGTATCCGGTGTTTACCCGGGCGCCAACGCCGAAGCCGTGATCCGCTCGGTCATTACGCCGCTGGAACAGGCTATCAACGGCGTGGAGAATATGCAGTATATGACCTCCAGCTCGGCCAATGACGGCAGCTTTTCGATCACGGTGATCTTCAAGCAAGGGGTCGACCCCGACCAGGCCGCGGTAAATGTGCAGAACCGCGTGGCACAGGCCAATGCACAGCTCCCCTCTGAAGTGATACGGCTGGGACTGAATACTACCAAGCAGCAGACCAGCTACCTGATGATCGTGAATATCAACAGCGATAAGCCCGAAAAATATGATGAGGGCTTCCTGCAGAATTATGTCAATATCAACCTGATCCCCGAGCTCAAACGGATTCCCGGTGTGGGCAATGCTACTGTTTTCGGGGCAAAGGACTATTCGGTGCGTGTATGGGTCAATCCCGTAAAGCTTTCGTCCTACGGGCTGGTGCCTTCCGATGTGGAAGCAGCCATACAGCAATATAGCTTTGAGGCTTCACCGGGCAGCCTGGGCGAAGAAACCGATGCTTCCTTGCAATATGTATTACGCTATAAAGGCAAGCTGAACAAGCCCGAAGAGTTTGAGCGGATCATCCTGCGTTCCAAAACCGATGGTACGATATTGCGCCTGGGAGATGTGGCCAGGATCGAGTTCGGACTGTCCAATTATTCCAGCGATACCTATACGGACGGTAAGCCTTCGGTGGTATTTGCGGTGCTGCAGGCCAGCGGTTCCAATGCCAATGATATCGCTATCGAGGTGCGCAGGTCTTTGGCCAGTTTCCAGAAAAGCTCGCCGGACGGCATCAATGTAGAGGTCATCCAGAATATGAAAGACCGCCTGGACGCTTCGGTTTCGCAAATGCAGTCCACCTTGATAGAAGCCTTTATCCTGGTATTTATCGTGGTGCTGGTTTTCCTACAGGACTTCCGTTCCACCATCATCCCCGCCATTGCCGTACCGGTTTCCATTATCGGGACCTTCTTCTTTATTTACCTGATCGGCTTTTCGGTAAATGTGCTCACCCTGTTTGCTTTGGTGCTCGCCATCGGTATCGTGGTGGATGATGCGATCGTGGTGGTGGAAGCGGTTCACGCCAAGATGCAGCAGACCGGGGAAAGCGCGAAAACAGCGACCGCTTCGGCGATGAGCGAGATCAGCGGGGCGATCATTTCCATTACGCTGGTGATGTCGGCGGTATTCCTGCCGGTCGGCTTTATGGAAGGTCCTGCGGGAATTTTCTATAAGCAGTTTTCCTATACGCTGGCGATAGCCATTTTAATATCGGCGGTAAATGCGCTGACCTTGAGCCCGGCATTGTGTGCCTTGATCTTAAAGAATCAGCATAGCAACGAACCCGGCGAAAAGCAGAAGTTCACGCAACGATTTGCCGGTGCCTTTAATACCGGCTTTGAACGGCTGACGGATAAGTATATCGGGGCTGTACGGTTTTTAGGCAAAAGAAAAAGCATTGCCATCGGAGCATTGGCGTTGGTTGCCTTCGGCGCATTTTTCCTGATGAATACCGCCCAGAAAGGGTTTGTGCCGGAAGAGGACGATAATAACCTGACCTTTGTGGTCAACCTCCAGGCGGGCGCCAACCTCCAGTTCATTACCAAAGAAATGGAAAAGGCCACCGAGATAGTCACCGCACTGCCCGAGGTAAAAAGCATCAGTACCGTTTCGGGATTCAGCCTTTTCAGTTCCGGCTCGGCGCCCAATTCCGCTATGGGCTTTATCACTTTGAAAAACCCGAAAGACCGGGGTAAAGTTTCGGATATCAACGAGGTGATGCACAAGATCGAAGACGCGATGAGAGGCCGGATAAGGGGTGAATTCCTGATCTTCCGTAATCCTGCGGTGGAAGGCTTTGGTACGGCCGGTGGTGTGGAGTTTGTGCTGCAGGACCGGGCTTCGGGCAGCATTGCCGATTTTGAAGCGGTCAGTCAAAAGGTGATCGCGGCATTAAGCGAACGGCCGGAGATCGGGATGGCGTTTACGACGTTCCGCAGCGATTACCCGCAGTACGAAGTGGTGCTGGATGAAGATAAGGCGCAGCAGCTGGGCTTAACGCCCAAAGAGGTGATGGACGCCTTGCAGCTGTATTTAACCGGTTCGCAAACCACCGATTTTGTACGCTTCGGACGGCTGTACCGCGTGAATGTGCGTTCGGAAGCGGAGTTCCGGAAAGATGAGGCATCGCTGAATAATATTATGATCCGCAATAACCTTAGCCAGATGGTGCCGATATCAACTTTGGTCACGCTTAAAAAGGTATTTGGCCCGCAGGGCATCAGCCGTTACAATTTGTACAACAGCATCAGCGTAAATGTGAATGCCGGTGCCGGTGCGAGCAGCGGCAAAGTGATGGGCGTGATAGATGAAGTATTGCAAAAGGAGCTGCCCAAAGGCTACAGTTACGAATACAGCGGGCTGAGCCTGCAGGAACGCAAATCGGGTTCGCAGATGGTCTTTATTTTCGGGCTGAGCATTTTGTTCGTGTACTTCCTGCTGGCGGCCCAGTACGAAAGTTACCTGTTGCCACTGGCGGTGATGCTGTCCCTGCCTACGGGTATTTTAGGGGTGTTTATCGCCACCGGGCTGGCCGGTATCGCCAATAATATTTATGTGCAGATCGCGATGATTATGCTGGTGGGACTGCTCGCCAAAAATGCCATTTTGATCGTGGAGTTTGCCGTACAGCAGCGCAAGGCAGGGCTGCCGGTTTTTGAAGCGGGTATCGCGGGAGCGCGGATGCGTTTGCGTCCTATCCTGATGACGTCCTTTGCTTTTGTGGCGGGACTGGTTCCGCTGATGTTTGCCAAAGGCGGAACGGCCATCGGTAACCAATCCATCAGCATCAGCGCGGCCGGCGGTATGCTCAGCGGTGTTGTGCTGGGCGTGCTGGTTATCCCGGTGCTGTATATGATCTTCCAGCGGTTGCAGGACAGGGTTTCGGGCGGGAAGGGGTAG
PROTEIN sequence
Length: 1042
MLNKIIKRPVLATVISIILVLLGIVGLLRIPMTQFPEIAPPTVFVSGVYPGANAEAVIRSVITPLEQAINGVENMQYMTSSSANDGSFSITVIFKQGVDPDQAAVNVQNRVAQANAQLPSEVIRLGLNTTKQQTSYLMIVNINSDKPEKYDEGFLQNYVNINLIPELKRIPGVGNATVFGAKDYSVRVWVNPVKLSSYGLVPSDVEAAIQQYSFEASPGSLGEETDASLQYVLRYKGKLNKPEEFERIILRSKTDGTILRLGDVARIEFGLSNYSSDTYTDGKPSVVFAVLQASGSNANDIAIEVRRSLASFQKSSPDGINVEVIQNMKDRLDASVSQMQSTLIEAFILVFIVVLVFLQDFRSTIIPAIAVPVSIIGTFFFIYLIGFSVNVLTLFALVLAIGIVVDDAIVVVEAVHAKMQQTGESAKTATASAMSEISGAIISITLVMSAVFLPVGFMEGPAGIFYKQFSYTLAIAILISAVNALTLSPALCALILKNQHSNEPGEKQKFTQRFAGAFNTGFERLTDKYIGAVRFLGKRKSIAIGALALVAFGAFFLMNTAQKGFVPEEDDNNLTFVVNLQAGANLQFITKEMEKATEIVTALPEVKSISTVSGFSLFSSGSAPNSAMGFITLKNPKDRGKVSDINEVMHKIEDAMRGRIRGEFLIFRNPAVEGFGTAGGVEFVLQDRASGSIADFEAVSQKVIAALSERPEIGMAFTTFRSDYPQYEVVLDEDKAQQLGLTPKEVMDALQLYLTGSQTTDFVRFGRLYRVNVRSEAEFRKDEASLNNIMIRNNLSQMVPISTLVTLKKVFGPQGISRYNLYNSISVNVNAGAGASSGKVMGVIDEVLQKELPKGYSYEYSGLSLQERKSGSQMVFIFGLSILFVYFLLAAQYESYLLPLAVMLSLPTGILGVFIATGLAGIANNIYVQIAMIMLVGLLAKNAILIVEFAVQQRKAGLPVFEAGIAGARMRLRPILMTSFAFVAGLVPLMFAKGGTAIGNQSISISAAGGMLSGVVLGVLVIPVLYMIFQRLQDRVSGGKG*