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scnpilot_solids2_trim150_scaffold_552_13

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(16644..17216)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE18_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 190.0
  • Bit_score: 283
  • Evalue 1.40e-73
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO44916.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 186.0
  • Bit_score: 291
  • Evalue 9.60e-76
RNA polymerase, sigma subunit, ECF family; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 190.0
  • Bit_score: 283
  • Evalue 4.50e-74

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
ATGAACAACCTGACTGATCAGCAACTCATCCATCTGTTTATTGAAGGGAATTCTGATGCACTCTCAAGTCTTATAGAACGTCATAAAGACAAGATCTACACTTCCATTTATTTATTAGTTAAGGACAGGTATCTTGCTGAAGATCTTTTTCAAGATACTTTCATCAAAGTGATTGACACAGTAAACGCCGGACGTTATACGGAAGAAGGCAAATTTTTACCCTGGGTAATGCGCATTGCCCATAACCTGTGTGTGGATCATTTCAGAAAGGTAAAGCGCAGCCCCTCTATTAAAACAAGTGATGATCGTGATATTTTTGAAACCATTAGCTTCTATGAACCGGGTGTAGATGAAAAAATAATGCAGGGGGAAAGCCATGGAAGGGTAAGCAAAATGCTTGATATGTTACCTGACGATCAAAGAGAAGTAATTATAATGAGACATTACGCAGACCTGAGTTTTAAAGAAATTGCAAAACTAACTGATTGCAGCATTAATACTGCATTGGGCCGTATGCGCTATGGGCTTATTAACTTAAGAAAAATGAAAATAGAAAGGCAAATTGCTTTGTAA
PROTEIN sequence
Length: 191
MNNLTDQQLIHLFIEGNSDALSSLIERHKDKIYTSIYLLVKDRYLAEDLFQDTFIKVIDTVNAGRYTEEGKFLPWVMRIAHNLCVDHFRKVKRSPSIKTSDDRDIFETISFYEPGVDEKIMQGESHGRVSKMLDMLPDDQREVIIMRHYADLSFKEIAKLTDCSINTALGRMRYGLINLRKMKIERQIAL*